Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G314000.1 | Wheat | nucleus | 98.49 | 97.63 |
| HORVU4Hr1G079900.1 | Barley | nucleus | 95.6 | 94.18 |
| TraesCS4D01G311200.2 | Wheat | nucleus | 98.11 | 88.24 |
| Os01t0267100-01 | Rice | nucleus | 68.05 | 70.81 |
| EER92855 | Sorghum | nucleus | 66.67 | 65.92 |
| Os03t0147700-01 | Rice | nucleus | 54.84 | 64.4 |
| Zm00001d027671_P001 | Maize | nucleus | 65.16 | 64.11 |
| GSMUA_Achr5P10590_001 | Banana | nucleus | 53.71 | 46.51 |
| CDX99517 | Canola | nucleus | 46.92 | 40.99 |
| Bra037896.1-P | Field mustard | nucleus | 47.92 | 40.88 |
| CDX86882 | Canola | nucleus | 47.04 | 40.87 |
| AT4G09980.1 | Thale cress | nucleus | 46.67 | 38.53 |
| Solyc05g056220.2.1 | Tomato | nucleus | 48.8 | 35.56 |
| PGSC0003DMT400059978 | Potato | nucleus | 48.55 | 35.38 |
| Solyc05g056210.2.1 | Tomato | nucleus | 48.55 | 35.28 |
| PGSC0003DMT400059980 | Potato | nucleus | 48.93 | 35.2 |
| KRG91570 | Soybean | nucleus | 48.3 | 34.97 |
| KRH35254 | Soybean | nucleus | 48.43 | 34.94 |
| VIT_16s0050g00820.t01 | Wine grape | nucleus | 50.19 | 32.57 |
| TraesCS6A01G254900.1 | Wheat | nucleus | 15.72 | 17.81 |
Protein Annotations
| MapMan:16.5.1.1.2 | InterPro:DNA_methylase_N6_adenine_CS | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0032259 |
| GO:GO:0080009 | InterPro:IPR007757 | InterPro:MT-A70-like | PFAM:PF05063 | ScanProsite:PS00092 | PFscan:PS51143 |
| PFscan:PS51592 | PANTHER:PTHR13107 | PANTHER:PTHR13107:SF1 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS4A01G413300 |
| EnsemblPlants:TraesCS4A01G413300.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:684584130..684589386
Molecular Weight (calculated)
88033.0 Da
IEP (calculated)
6.661
GRAVY (calculated)
-1.001
Length
795 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGSKSNAEE DDYHVIGDLR SPKIPRRSPD GSKERDDRKG WDSSRSETSA DRADTRDGGY SSDHNKHGRE KEMIHGHADE SGGIRKGVDS SSSRGGRSDE
101: DINERRGSAM AENINEDGRP ADQSHQKEEI LGHTVEYGHE SKGGVEKEET SPRVGNDGWE SSGDRRNRDA PPSQIPDTPD RGRDSSWNVK TQEVEGSEQY
201: SRSRQLRDPK EANVSEWRST QERLDGTSFQ GRAGYRQDSR GRSESFRGSS TYGNRYDRSD SIEIRPNSNF DFGREGSVSG RRSDVGAPGT TDDSSTNHPE
301: ADQSGGTSMV SPFTQQGPKG DRSSRGRGRP TGRDSQRIGV PVPLMPPPSF GALALPPGQM QHMGPNIPHS PGPPLLPGVF MPPFPGPMVW PGAGGVDVNM
401: LSVPPNLHIP PPVAGEHRFT PSMGAGPVHN VHLNQMGPGM GTPTNMSGLG FNQMSTQNRE MTHDKPSGGW VPHRHGAPIR KAPSRGEQND YSQNFVDTGM
501: RPQNFIRELD LTSVAEDYPK LRELIQRKDE IVTNAASPPM YFKCDLRQHV LSPEFFGTKF DVILVDPPWE EYVHRAPGIT DHIEYWNAEE IMNLKIEAIA
601: DTPSFLFLWV GDGVGLEQGR QCLKKWGFRR CEDVCWVKTN KKNASSGLRH DSRTLLQHSK EHCLMGIKGT VRRSTDGHVI HANIDTDIII AEEPTDGSTK
701: KPDDMYRIIE HFALGKRRLE LFGEDHNIRP GWLTLGKDLS YSNFNKEAYN KNFADSDGKV WQGGGGRNPP PGAPHLIVTT PEIEGLRPKS PPPKN
101: DINERRGSAM AENINEDGRP ADQSHQKEEI LGHTVEYGHE SKGGVEKEET SPRVGNDGWE SSGDRRNRDA PPSQIPDTPD RGRDSSWNVK TQEVEGSEQY
201: SRSRQLRDPK EANVSEWRST QERLDGTSFQ GRAGYRQDSR GRSESFRGSS TYGNRYDRSD SIEIRPNSNF DFGREGSVSG RRSDVGAPGT TDDSSTNHPE
301: ADQSGGTSMV SPFTQQGPKG DRSSRGRGRP TGRDSQRIGV PVPLMPPPSF GALALPPGQM QHMGPNIPHS PGPPLLPGVF MPPFPGPMVW PGAGGVDVNM
401: LSVPPNLHIP PPVAGEHRFT PSMGAGPVHN VHLNQMGPGM GTPTNMSGLG FNQMSTQNRE MTHDKPSGGW VPHRHGAPIR KAPSRGEQND YSQNFVDTGM
501: RPQNFIRELD LTSVAEDYPK LRELIQRKDE IVTNAASPPM YFKCDLRQHV LSPEFFGTKF DVILVDPPWE EYVHRAPGIT DHIEYWNAEE IMNLKIEAIA
601: DTPSFLFLWV GDGVGLEQGR QCLKKWGFRR CEDVCWVKTN KKNASSGLRH DSRTLLQHSK EHCLMGIKGT VRRSTDGHVI HANIDTDIII AEEPTDGSTK
701: KPDDMYRIIE HFALGKRRLE LFGEDHNIRP GWLTLGKDLS YSNFNKEAYN KNFADSDGKV WQGGGGRNPP PGAPHLIVTT PEIEGLRPKS PPPKN
001: MKKKQEESSL EKLSTWYQDG EQDGGDRSEK RRMSLKASDF ESSSRSGGSK SKEDNKSVVD VEHQDRDSKR ERDGRERTHG SSSDSSKRKR WDEAGGLVND
101: GDHKSSKLSD SRHDSGGERV SVSNEHGESR RDLKSDRSLK TSSRDEKSKS RGVKDDDRGS PLKKTSGKDG SEVVREVGRS NRSKTPDADY EKEKYSRKDE
201: RSRGRDDGWS DRDRDQEGLK DNWKRRHSSS GDKDQKDGDL LYDRGREREF PRQGRERSEG ERSHGRLGGR KDGNRGEAVK ALSSGGVSNE NYDVIEIQTK
301: PHDYVRGESG PNFARMTESG QQPPKKPSNN EEEWAHNQEG RQRSETFGFG SYGEDSRDEA GEASSDYSGA KARNQRGSTP GRTNFVQTPN RGYQTPQGTR
401: GNRPLRGGKG RPAGGRENQQ GAIPMPIMGS PFANLGMPPP SPIHSLTPGM SPIPGTSVTP VFMPPFAPTL IWPGARGVDG NMLPVPPVLS PLPPGPSGPR
501: FPSIGTPPNP NMFFTPPGSD RGGPPNFPGS NISGQMGRGM PSDKTSGGWV PPRGGGPPGK APSRGEQNDY SQNFVDTGMR PQNFIRELEL TNVEDYPKLR
601: ELIQKKDEIV SNSASAPMYL KGDLHEVELS PELFGTKFDV ILVDPPWEEY VHRAPGVSDS MEYWTFEDII NLKIEAIADT PSFLFLWVGD GVGLEQGRQC
701: LKKWGFRRCE DICWVKTNKS NAAPTLRHDS RTVFQRSKEH CLMGIKGTVR RSTDGHIIHA NIDTDVIIAE EPPYGSTQKP EDMYRIIEHF ALGRRRLELF
801: GEDHNIRAGW LTVGKGLSSS NFEPQAYVRN FADKEGKVWL GGGGRNPPPD APHLVVTTPD IESLRPKSPM KNQQQQSYPS SLASANSSNR RTTGNSPQAN
901: PNVVVLHQEA SGSNFSVPTT PHWVPPTAPA AAGPPPMDSF RVPEGGNNTR PPDDKSFDMY GFN
101: GDHKSSKLSD SRHDSGGERV SVSNEHGESR RDLKSDRSLK TSSRDEKSKS RGVKDDDRGS PLKKTSGKDG SEVVREVGRS NRSKTPDADY EKEKYSRKDE
201: RSRGRDDGWS DRDRDQEGLK DNWKRRHSSS GDKDQKDGDL LYDRGREREF PRQGRERSEG ERSHGRLGGR KDGNRGEAVK ALSSGGVSNE NYDVIEIQTK
301: PHDYVRGESG PNFARMTESG QQPPKKPSNN EEEWAHNQEG RQRSETFGFG SYGEDSRDEA GEASSDYSGA KARNQRGSTP GRTNFVQTPN RGYQTPQGTR
401: GNRPLRGGKG RPAGGRENQQ GAIPMPIMGS PFANLGMPPP SPIHSLTPGM SPIPGTSVTP VFMPPFAPTL IWPGARGVDG NMLPVPPVLS PLPPGPSGPR
501: FPSIGTPPNP NMFFTPPGSD RGGPPNFPGS NISGQMGRGM PSDKTSGGWV PPRGGGPPGK APSRGEQNDY SQNFVDTGMR PQNFIRELEL TNVEDYPKLR
601: ELIQKKDEIV SNSASAPMYL KGDLHEVELS PELFGTKFDV ILVDPPWEEY VHRAPGVSDS MEYWTFEDII NLKIEAIADT PSFLFLWVGD GVGLEQGRQC
701: LKKWGFRRCE DICWVKTNKS NAAPTLRHDS RTVFQRSKEH CLMGIKGTVR RSTDGHIIHA NIDTDVIIAE EPPYGSTQKP EDMYRIIEHF ALGRRRLELF
801: GEDHNIRAGW LTVGKGLSSS NFEPQAYVRN FADKEGKVWL GGGGRNPPPD APHLVVTTPD IESLRPKSPM KNQQQQSYPS SLASANSSNR RTTGNSPQAN
901: PNVVVLHQEA SGSNFSVPTT PHWVPPTAPA AAGPPPMDSF RVPEGGNNTR PPDDKSFDMY GFN
Arabidopsis Description
EMB1691EMB1691 [Source:UniProtKB/TrEMBL;Acc:A0A178V0G2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.