Factsheet for TraesCS6A01G254900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS7A01G234600.1
TraesCS7B01G132800.1
TraesCS7D01G234600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G10760.1	TraesCS7A01G234600.1	AT3G54170.1	18505803
AT4G10760.1	TraesCS7B01G132800.1	AT3G54170.1	18505803
AT4G10760.1	TraesCS7D01G234600.1	AT3G54170.1	18505803

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G236200.1	Wheat	nucleus	98.72	98.72
TraesCS6B01G270600.1	Wheat	nucleus	96.44	97.27
HORVU6Hr1G064940.1	Barley	mitochondrion	97.58	93.07
Os02t0672600-01	Rice	nucleus	83.19	82.72
EES07469	Sorghum	cytosol	82.91	82.44
Zm00001d017566_P001	Maize	extracellular	81.62	81.39
CDY53519	Canola	mitochondrion	49.29	65.28
Bra035280.1-P	Field mustard	mitochondrion	49.43	65.23
GSMUA_Achr11P...	Banana	nucleus	56.41	64.6
GSMUA_Achr8P11830_001	Banana	nucleus	63.53	62.82
AT4G10760.1	Thale cress	cytosol	55.56	56.93
VIT_02s0025g02400.t01	Wine grape	nucleus	60.83	55.89
Solyc08g066730.2.1	Tomato	nucleus	58.83	55.89
PGSC0003DMT400011022	Potato	cytosol, nucleus, plastid	58.26	55.35
CDX86845	Canola	nucleus	50.0	54.25
KRH48077	Soybean	nucleus	57.12	52.62
KRH06595	Soybean	cytosol, nucleus, plastid	56.98	52.56
TraesCS4A01G413300.1	Wheat	nucleus	17.81	15.72

Protein Annotations

MapMan:16.5.1.1.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654
GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016607	GO:GO:0080009	InterPro:IPR007757	InterPro:MT-A70-like	PFAM:PF05063
PFscan:PS51143	PANTHER:PTHR12829	PANTHER:PTHR12829:SF2	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS6A01G254900
EnsemblPlants:TraesCS6A01G254900.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:472504463..472509165

Molecular Weight (calculated)

77649.2 Da

IEP (calculated)

7.075

GRAVY (calculated)

-0.476

Length

702 amino acids

Sequence
(BLAST)

001: MEAKADVAAG GGDDLSTMRE QCRSMEEAIS FRREAQLGLV GSLQHLVPDL VPSLDRSLRL IAAFNDRPFT PTPNPNAGDP QNPSLKPHHR RTVPDPARST
101: RRKTSPGSSP ASAAVGGAAP GGLDAVRTMV AVFLLELIPF AEIDAAVLAR RLQAESSSAS DAERAALADL ATELGGSVPA AVALALRRIA EDSGGVQIEE
201: AMIGGKQMMM VWAIDRSKLL KELPESATLL SPQPPPIPQA TSSETDANSA IIPRPPPPHQ QQQPDMWAHS MPPMFPRPRG MTMPGMQRMM PGLMPLQRPF
301: MAPSPGPSPT QQNQRTEEED LKDLEVLLSK KTYKEKQNTK TGEELLDLIH RPTAKETAVA AKFKTKGGSQ LKEYCTNLTK EDCRRQSGSF VSCAKVHFRR
401: IIAPHTDTNL GDCSFLDTCR HTKTCKYVHY ELDQTPDIAP MMAGTLAPPR QIKPHRAEYC SEIELGESQW INCDIRNFRM DILGQFGVIM ADPPWDIHME
501: LPYGTMADDE MRTLNVPALQ TDGLIFLWVT GRAMELGREC LELWGYKRVE EIIWVKTNQL QRIIRTGRTG HWLNHSKEHC LVGIKGSPLV NRNIDTDVIV
601: AEVRETSRKP DEMYAMLERI SPRTRKLELF ARMHNTQAGW LSLGNQVSGT RLVDEGLRAR YKAAYPDFEV QPPSPPRASA PMDVDQSTPS QKPVASDGER
701: PA

Best Arabidopsis Sequence Match ( AT4G10760.1 )
(BLAST)

001: METESDDATI TVVKDMRVRL ENRIRTQHDA HLDLLSSLQS IVPDIVPSLD LSLKLISSFT NRPFVATPPL PEPKVEKKHH PIVKLGTQLQ QLHGHDSKSM
101: LVDSNQRDAE ADGSSGSPMA LVRAMVAECL LQRVPFSPTD SSTVLRKLEN DQNARPAEKA ALRDLGGECG PILAVETALK SMAEENGSVE LEEFEVSGKP
201: RIMVLAIDRT RLLKELPESF QGNNESNRVV ETPNSIENAT VSGGGFGVSG SGNFPRPEMW GGDPNMGFRP MMNAPRGMQM MGMHHPMGIM GRPPPFPLPL
301: PLPVPSNQKL RSEEEDLKDV EALLSKKSFK EKQQSRTGEE LLDLIHRPTA KEAATAAKFK SKGGSQVKYY CRYLTKEDCR LQSGSHIACN KRHFRRLIAS
401: HTDVSLGDCS FLDTCRHMKT CKYVHYELDM ADAMMAGPDK ALKPLRADYC SEAELGEAQW INCDIRSFRM DILGTFGVVM ADPPWDIHME LPYGTMADDE
501: MRTLNVPSLQ TDGLIFLWVT GRAMELGREC LELWGYKRVE EIIWVKTNQL QRIIRTGRTG HWLNHSKEHC LVGIKGNPEV NRNIDTDVIV AEVRETSRKP
601: DEMYAMLERI MPRARKLELF ARMHNAHAGW LSLGNQLNGV RLINEGLRAR FKASYPEIDV QPPSPPRASA METDNEPMAI DSITA

Arabidopsis Description

MTAN6-adenosine-methyltransferase MT-A70-like [Source:UniProtKB/Swiss-Prot;Acc:O82486]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.