CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027671_P001	Maize	nucleus	86.82	86.39
Os01t0267100-01	Rice	nucleus	68.66	72.25
TraesCS4A01G413300.1	Wheat	nucleus	65.92	66.67
TraesCS4B01G314000.1	Wheat	nucleus	66.17	66.33
HORVU4Hr1G079900.1	Barley	nucleus	65.92	65.68
Os03t0147700-01	Rice	nucleus	55.1	65.44
TraesCS4D01G311200.2	Wheat	nucleus	66.17	60.18
GSMUA_Achr5P10590_001	Banana	nucleus	56.09	49.13
CDX99517	Canola	nucleus	48.63	42.97
CDX86882	Canola	nucleus	47.76	41.97
Bra037896.1-P	Field mustard	nucleus	48.13	41.52
AT4G09980.1	Thale cress	nucleus	47.89	39.98
Solyc05g056220.2.1	Tomato	nucleus	50.5	37.21
KRH35254	Soybean	nucleus	50.99	37.21
KRG91570	Soybean	nucleus	50.62	37.07
PGSC0003DMT400059978	Potato	nucleus	50.25	37.03
Solyc05g056210.2.1	Tomato	nucleus	49.75	36.56
PGSC0003DMT400059980	Potato	nucleus	50.25	36.56
VIT_16s0050g00820.t01	Wine grape	nucleus	53.11	34.86
EES07469	Sorghum	cytosol	15.42	17.56

Protein Annotations

MapMan:16.5.1.1.2	EntrezGene:8080556	UniProt:C5WXX9	InterPro:DNA_methylase_N6_adenine_CS	EnsemblPlants:EER92855	ProteinID:EER92855
ProteinID:EER92855.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259	GO:GO:0080009
InterPro:IPR007757	InterPro:MT-A70-like	PFAM:PF05063	ScanProsite:PS00092	PFscan:PS51143	PFscan:PS51592
PANTHER:PTHR13107	PANTHER:PTHR13107:SF1	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3001G503900	SUPFAM:SSF53335	UniParc:UPI0001A82BAE
RefSeq:XP_002465857.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:77218640..77223738

Molecular Weight (calculated)

90612.8 Da

IEP (calculated)

7.012

GRAVY (calculated)

-1.145

Length

804 amino acids

Sequence
(BLAST)

001: MDGPESSRGH SKQEVEDSVN ARNSWKEEHE NQENADSRNY SDMSRKHGYE YEVGHQDDNR MITPSNDRNE SRRNADRSSG LACGADDDVY NMRRDSRSPK
101: VPRRSPDDSK DRDYDRRRGR EDKNDWEPSR RFSPDASARS SERREGSREK QGQRDQEVRR ADEVYVDENG GSLRVDTREA YRDDKSDRGR DRNWNEKTRD
201: IEGSKDYGRN TQLRDAKEPN DSEWRNAQER LDGGNFHGRG GYRRDSRGRS ESVRGPLTYG NRYDNSDSIE IRPNSNLNFG REGSVSGRRF EVGAHRDSVP
301: GGTDDKSSDH PESDPSGSTG MVSSFPQQGP KGDRPSRGGR GRPNGRDSQR IGVPMPIMPP PFGPLGLPPG PMQHMGPNIP HSPGPPLLPG VFMPPFPGPL
401: VWPGARGVDV NMLSVPPNLP IPPVAPEHRF TPNVGAGSGH NIHLNQMDTG LGAPTDVSGL GYNNMGPQSR DMLHDKPGWT PHRNSGPNRK APSRGEQNDY
501: SQNFVDTGMR PQNFIRELDL TSVAEDYPKL RELIQRKDEI VAKSASPPMY YKCDLREHVL SPEFFGTKFD VILVDPPWEE YTHRAPGITD HIEYWTAEEI
601: MNLKIEAIAD TPSFVFLWVG DGVGLEQGRQ CLKKWGFRRC EDVCWVKTNK KNAAPSLRHD SHTLLQHSKE HCLMGIKGTV RRSTDGHVIH ANIDTDIIIA
701: EEPTDGSTKK PDDMYRIIEH FALGRRRLEL FGEDHNIRPG WLTLGKNLSY SNFNKEAYIR NFADKDGKVW QGGGGRNPPP EAPHLVVTTP EIESLRPKSP
801: PAKN

Best Arabidopsis Sequence Match ( AT4G09980.1 )
(BLAST)

001: MKKKQEESSL EKLSTWYQDG EQDGGDRSEK RRMSLKASDF ESSSRSGGSK SKEDNKSVVD VEHQDRDSKR ERDGRERTHG SSSDSSKRKR WDEAGGLVND
101: GDHKSSKLSD SRHDSGGERV SVSNEHGESR RDLKSDRSLK TSSRDEKSKS RGVKDDDRGS PLKKTSGKDG SEVVREVGRS NRSKTPDADY EKEKYSRKDE
201: RSRGRDDGWS DRDRDQEGLK DNWKRRHSSS GDKDQKDGDL LYDRGREREF PRQGRERSEG ERSHGRLGGR KDGNRGEAVK ALSSGGVSNE NYDVIEIQTK
301: PHDYVRGESG PNFARMTESG QQPPKKPSNN EEEWAHNQEG RQRSETFGFG SYGEDSRDEA GEASSDYSGA KARNQRGSTP GRTNFVQTPN RGYQTPQGTR
401: GNRPLRGGKG RPAGGRENQQ GAIPMPIMGS PFANLGMPPP SPIHSLTPGM SPIPGTSVTP VFMPPFAPTL IWPGARGVDG NMLPVPPVLS PLPPGPSGPR
501: FPSIGTPPNP NMFFTPPGSD RGGPPNFPGS NISGQMGRGM PSDKTSGGWV PPRGGGPPGK APSRGEQNDY SQNFVDTGMR PQNFIRELEL TNVEDYPKLR
601: ELIQKKDEIV SNSASAPMYL KGDLHEVELS PELFGTKFDV ILVDPPWEEY VHRAPGVSDS MEYWTFEDII NLKIEAIADT PSFLFLWVGD GVGLEQGRQC
701: LKKWGFRRCE DICWVKTNKS NAAPTLRHDS RTVFQRSKEH CLMGIKGTVR RSTDGHIIHA NIDTDVIIAE EPPYGSTQKP EDMYRIIEHF ALGRRRLELF
801: GEDHNIRAGW LTVGKGLSSS NFEPQAYVRN FADKEGKVWL GGGGRNPPPD APHLVVTTPD IESLRPKSPM KNQQQQSYPS SLASANSSNR RTTGNSPQAN
901: PNVVVLHQEA SGSNFSVPTT PHWVPPTAPA AAGPPPMDSF RVPEGGNNTR PPDDKSFDMY GFN

Arabidopsis Description

EMB1691EMB1691 [Source:UniProtKB/TrEMBL;Acc:A0A178V0G2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.