CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES00942
EES01101
EES07974
KXG20211
KXG30344

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G52640.1	EES00942	AT2G26150.1	19366428
AT5G52640.1	KXG20211	AT2G26150.1	19366428
AT5G52640.1	EES07974	AT3G21640.1	12410806
AT5G52640.1	EES01101	AT4G11260.1	18065690
AT5G52640.1	KXG30344	AT5G51700.1	18065690

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024903_P001	Maize	plasma membrane	96.37	96.64
TraesCS2A01G033700.1	Wheat	plastid	90.22	91.37
TraesCS2D01G033200.2	Wheat	golgi	90.78	91.29
TraesCS2B01G047400.1	Wheat	cytosol	90.5	91.01
Os04t0107900-02	Rice	cytosol	31.56	90.76
Solyc03g007890.2.1	Tomato	cytosol, extracellular, nucleus, plastid	88.55	90.7
PGSC0003DMT400024594	Potato	cytosol	88.69	90.2
KRH38373	Soybean	nucleus	87.71	89.84
AT5G52640.1	Thale cress	cytosol	87.57	89.57
KRH08858	Soybean	nucleus	87.43	89.56
VIT_16s0050g01150.t01	Wine grape	cytosol	87.85	89.35
PGSC0003DMT400074377	Potato	cytosol	50.98	89.24
CDY27839	Canola	cytosol	87.57	88.94
Solyc06g036290.2.1	Tomato	nucleus, plastid	75.28	88.8
GSMUA_Achr8P19130_001	Banana	cytosol	72.07	88.66
VIT_02s0025g00280.t01	Wine grape	cytosol	87.01	88.62
EER96954	Sorghum	cytosol	84.08	86.12
EES14299	Sorghum	cytosol	83.94	86.1
EER99075	Sorghum	cytosol	83.94	85.98
PGSC0003DMT400074374	Potato	cytosol	36.73	85.95
Bra003119.1-P	Field mustard	plastid	69.69	82.07
CDY50297	Canola	plastid	71.37	80.35
PGSC0003DMT400014217	Potato	cytosol	31.15	77.7
KRH04730	Soybean	cytosol	37.71	75.0
VIT_13s0106g00410.t01	Wine grape	cytosol	9.78	57.38
KXG20895	Sorghum	endoplasmic reticulum	49.58	43.99
EES14330	Sorghum	plastid	45.25	41.12
KXG23570	Sorghum	mitochondrion, plastid	42.6	37.79
VIT_05s0094g00110.t01	Wine grape	nucleus, peroxisome, plastid	11.45	30.6

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
EntrezGene:8057342	UniProt:C5YBL4	EnsemblPlants:EES11741	ProteinID:EES11741	ProteinID:EES11741.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0009816	GO:GO:0009987	GO:GO:0051082
GO:GO:0061077	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N
InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196	HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518
PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF74	InterPro:Ribosomal_S5_D2-typ_fold
SMART:SM00387	EnsemblPlantsGene:SORBI_3006G005600	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	unigene:Sbi.4832
UniParc:UPI0001A8714E	RefSeq:XP_002447413.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:868221..871154

Molecular Weight (calculated)

81755.9 Da

IEP (calculated)

4.718

GRAVY (calculated)

-0.576

Length

716 amino acids

Sequence
(BLAST)

001: MASADVHMAG GGAETETFAF QAEINQLLSL IINTFYSNKE IFLRELISNA SDALDKIRFE SLTDKSKLDA QPELFIRLVP DKATKTLSII DSGVGMTKSD
101: LVNNLGTIAR SGTKEFMEAL AAGATDVSMI GQFGVGFYSA YLVADKVVVT TKHNDDDQYV WESQAGGSFT VTLDTTGERL GRGTKITLFL KDDQLEYLEE
201: RRLKDLVKKH SEFISYPIYL WTEKTTEKEI SDDEDDEDKK EGDVEEVDDD DGDKDDKDSK TTKKKKKVKE VTHEWVQINK QKPIWLRKPE EITREEYASF
301: YKSLTNDWED HLAVKHFAVE GQLEFKAILF VPRRAPFDLF DTRKKLNNIK LYVRRVFIMD NCEELIPEWL GFVKGVVDSD DLPLNISRET LQQNKILKVI
401: RKNLVKKCIE MFFEIAENKD DYAKFYDAFS KNIKLGIHED SQNRAKLADL LRYHSTKSGD EMTSLKDYVT RMKEGQKDIY YITGESKKAV ENSPFLERLK
501: KKGYEVLFMV DAIDEYAVGQ LKEYDGKKLV SATKEGLKLD DDDEEAKKRR EERKKQFEDL CKVIKDILGD RVEKVVVSDR IVDSPCCLVT GEYGWTANME
601: RIMKAQALRD SSMSAYMSSK KTMEINPDNG IMEELRKRAE ADRNDKSVKD LVLLLFETAL LTSGFSLDDP NTFAARIHRM LKLGLNIDED AAADEDADMP
701: ALEEGAAEES KMEEVD

Best Arabidopsis Sequence Match ( AT5G52640.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIRLVPD KSNKTLSIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALQ AGADVSMIGQ FGVGFYSAYL VAEKVVVTTK HNDDEQYVWE SQAGGSFTVT RDVDGEPLGR GTKITLFLKD DQLEYLEERR LKDLVKKHSE
201: FISYPIYLWT EKTTEKEISD DEDEDEPKKE NEGEVEEVDE EKEKDGKKKK KIKEVSHEWE LINKQKPIWL RKPEEITKEE YAAFYKSLTN DWEDHLAVKH
301: FSVEGQLEFK AILFVPKRAP FDLFDTRKKL NNIKLYVRRV FIMDNCEELI PEYLSFVKGV VDSDDLPLNI SRETLQQNKI LKVIRKNLVK KCIEMFNEIA
401: ENKEDYTKFY EAFSKNLKLG IHEDSQNRGK IADLLRYHST KSGDEMTSFK DYVTRMKEGQ KDIFYITGES KKAVENSPFL ERLKKRGYEV LYMVDAIDEY
501: AVGQLKEYDG KKLVSATKEG LKLEDETEEE KKKREEKKKS FENLCKTIKE ILGDKVEKVV VSDRIVDSPC CLVTGEYGWT ANMERIMKAQ ALRDSSMSGY
601: MSSKKTMEIN PDNGIMEELR KRAEADKNDK SVKDLVMLLY ETALLTSGFS LDEPNTFAAR IHRMLKLGLS IDEDENVEED GDMPELEEDA AEESKMEEVD

Arabidopsis Description

HSP90-1Heat shock protein 90-1 [Source:UniProtKB/Swiss-Prot;Acc:P27323]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.