CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041719_P001	Maize	mitochondrion	94.05	93.36
Zm00001d035285_P003	Maize	extracellular	92.07	92.41
Os12t0514500-01	Rice	mitochondrion	85.5	85.08
TraesCS5A01G101900.2	Wheat	mitochondrion	84.01	83.09
TraesCS5B01G106300.1	Wheat	mitochondrion	84.26	82.62
HORVU5Hr1G027910.13	Barley	plastid	83.64	77.77
GSMUA_Achr10P...	Banana	mitochondrion	73.61	75.19
KRH74006	Soybean	mitochondrion	71.13	72.57
Solyc07g047790.2.1	Tomato	mitochondrion, nucleus, plastid	71.38	72.54
PGSC0003DMT400015734	Potato	mitochondrion	71.25	72.42
KRH14117	Soybean	mitochondrion	71.13	72.02
TraesCS5D01G113700.1	Wheat	mitochondrion, plastid	84.39	71.16
VIT_12s0057g00670.t01	Wine grape	cytosol	73.23	69.78
AT3G07770.3	Thale cress	mitochondrion	68.53	69.21
CDY35962	Canola	mitochondrion	68.65	68.99
Bra040027.1-P	Field mustard	mitochondrion	68.28	68.53
CDY22132	Canola	mitochondrion	68.15	68.41
Bra029677.1-P	Field mustard	mitochondrion	60.97	67.77
CDY28017	Canola	mitochondrion	66.05	67.73
EES14330	Sorghum	plastid	60.97	62.44
EES14299	Sorghum	cytosol	37.92	43.84
EER96954	Sorghum	cytosol	37.05	42.78
EER99075	Sorghum	cytosol	36.93	42.63
EES11741	Sorghum	cytosol	37.79	42.6
KXG20895	Sorghum	endoplasmic reticulum	40.02	40.02

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
UniProt:A0A1B6PCZ0	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C
InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890
InterPro:IPR037196	EnsemblPlants:KXG23570	ProteinID:KXG23570	ProteinID:KXG23570.1	HAMAP:MF_00505	PFAM:PF00183
PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF41
InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	EnsemblPlantsGene:SORBI_3008G111600	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874
UniParc:UPI0003C71D1D	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:51719209..51726960

Molecular Weight (calculated)

90615.0 Da

IEP (calculated)

4.840

GRAVY (calculated)

-0.496

Length

807 amino acids

Sequence
(BLAST)

001: MIGASRRSLS AAAAAAARSR VAASAASAVS ADADASSVPP RPVSNGAPGV PQQQKRLLSV LAAPKVAGTS NVVSLKLMDG ALIGRRYESS AAAVDSTDLP
101: AEKHEYQAEV NRLMDLIVHS LYSNKEVFLR ELVSNASDAL DKLRYLSVTD PELLKDGPQL DIRIQTDKDN GIITITDSGI GMTKQELIDS LGTIASSGTA
201: KFLKALKESQ EAGMDSNLIG QFGVGFYSAF LVSEKVVVST KSPKSDKQYV WEGQADSGSY TIREENDPEK LIPRGTRLTL YLKRDDKGFA HPERIQKLLK
301: NYSQFVSFPI YTLQEKGFTK EVEVDEDPAE AQKEGDEPKK KTKTVVEKYW DWELANETQP IWLRNPKEVS TEEYNEFYKK TFNEYLDPLA SSHFTTEGEV
401: EFRSILFVPA TRKDDITDSR KTKNIRLYVK RVFISDDFDG ELFPRYLSFV KGVVDSNDLP LNVSREILQE SRIVRIMRKR LVRKAFDMIL GISCSENRDD
501: YERFWENYGK FLKLGAMEDK ENHKRIAPLL RFFSSQSNDE LISLDEYVEN MKPEQKDIYF IAADSLSSAK NAPFLERLTE KEYEVLLFVD PMDEVAIQNL
601: VSYKDKKFVD ISKEDLDLGD NNEEREKEIK QEFSQTCDWI KNRLGDKVAR VDISNRLRSS PCVLVAAKFG WSANMERLMR AQSMGDTSSL DFMRSRKVFE
701: INPEHEIIKA LNVACRNNPD DPEALKALDV LFETAMISSG FSPDNPAELS GKIYEMMTSA IAGKWSSQSE AQPANPIPQH SAPVMSDEPL EAEVVESEPA
801: ADAGQQK

Best Arabidopsis Sequence Match ( AT3G07770.2 )
(BLAST)

001: MIRLSKRSVS TLLRSGNQSF RIAAAASTSR SSPSATDVKR SDTESRWYSS LTNGQSKNSG SFAQLNMKTN WFMGYRNESS AAASDSSSQA PPPAEKFEYQ
101: AEVSRLMDLI VNSLYSNKEV FLRELISNAS DALDKLRYLS VTNPELSKDA PDLDIRIYAD KENGIITLTD SGIGMTRQEL VDCLGTIAQS GTAKFMKALK
201: DSKDAGGDNN LIGQFGVGFY SAFLVADRVI VSTKSPKSDK QYVWEGEANS SSFTIQEDTD PQSLIPRGTR ITLHLKQEAK NFADPERIQK LVKNYSQFVS
301: FPIYTWQEKG YTKEVEVEDD PTETKKDDQD DQTEKKKKTK KVVERYWDWE LTNETQPIWL RNPKEVTTAE YNEFYRKAFN EYLDPLASSH FTTEGEVEFR
401: SILYVPPVSP SGKDDIVNQK TKNIRLYVKR VFISDDFDGE LFPRYLSFVK GVVDSHDLPL NVSREILQES RIVRIMKKRL VRKAFDMILG ISLSENREDY
501: EKFWDNFGKH LKLGCIEDRE NHKRIAPLLR FFSSQSENDM ISLDEYVENM KPEQKAIYFI ASDSITSAKN APFLEKMLEK GLEVLYLVEP IDEVAVQSLK
601: AYKEKDFVDI SKEDLDLGDK NEEKEAAVKK EFGQTCDWIK KRLGDKVASV QISNRLSSSP CVLVSGKFGW SANMERLMKA QSTGDTISLD YMKGRRVFEI
701: NPDHSIIKNI NAAYNSNPND EDAMRAIDLM YDAALVSSGF TPDNPAELGG KIYEMMDVAL SGKWSSPEVQ PQQQQMAHSH DAETFEAEVV EPVEVDGKK

Arabidopsis Description

HSP90-6Heat shock protein 90-6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JFN3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.