Factsheet for TraesCS5D01G113700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G101900.2	Wheat	mitochondrion	84.22	98.77
TraesCS5B01G106300.1	Wheat	mitochondrion	84.12	97.81
HORVU5Hr1G027910.13	Barley	plastid	84.01	92.63
Os12t0514500-01	Rice	mitochondrion	73.98	87.3
KXG23570	Sorghum	mitochondrion, plastid	71.16	84.39
Zm00001d041719_P001	Maize	mitochondrion	70.11	82.53
Zm00001d035285_P003	Maize	extracellular	68.86	81.97
GSMUA_Achr10P...	Banana	mitochondrion	61.55	74.56
KRH74006	Soybean	mitochondrion	60.08	72.69
PGSC0003DMT400015734	Potato	mitochondrion	60.08	72.42
Solyc07g047790.2.1	Tomato	mitochondrion, nucleus, plastid	59.98	72.29
KRH14117	Soybean	mitochondrion	59.98	72.02
VIT_12s0057g00670.t01	Wine grape	cytosol	63.01	71.19
AT3G07770.3	Thale cress	mitochondrion	57.99	69.46
Bra040027.1-P	Field mustard	mitochondrion	58.1	69.15
CDY22132	Canola	mitochondrion	57.99	69.03
CDY35962	Canola	mitochondrion	57.47	68.49
Bra029677.1-P	Field mustard	mitochondrion	51.41	67.77
CDY28017	Canola	mitochondrion	55.49	67.47
TraesCS5D01G258900.2	Wheat	plastid	50.47	61.84
TraesCS7D01G241100.1	Wheat	golgi	31.35	42.86
TraesCS5D01G268000.1	Wheat	cytosol	31.24	42.71
TraesCS2D01G033200.2	Wheat	golgi	31.45	42.28
TraesCS7D01G517800.1	Wheat	golgi, plastid	33.12	37.92
TraesCS6D01G046900.1	Wheat	cytosol	5.64	27.98
TraesCS5D01G258800.1	Wheat	cytosol	0.63	2.4

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196
HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528
PANTHER:PTHR11528:SF41	InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874
EnsemblPlantsGene:TraesCS5D01G113700	EnsemblPlants:TraesCS5D01G113700.1	TIGR:cd00075	SEG:seg	:	:

Description

No Description!

Coordinates

chr5D:+:132411582..132418313

Molecular Weight (calculated)

107264.0 Da

IEP (calculated)

7.087

GRAVY (calculated)

-0.571

Length

957 amino acids

Sequence
(BLAST)

001: MLQRKVPTWS WVTHNHAPTG PTCQPPCMIH RLSTPVHIAL LRAPAPEPSP ETLTPPSKPK PPSPLSHRQP GTTVPAKRTP SFLIRKAHPI YTPHPLCLRS
101: PPQNPTPLPK PSHRRLPRSA HLRKRASSPH LSPSTGRRTS SAAEMLGASR RSLCAGAAAR RHAAAFAVSG DAAAAASSSP SLSPSAPPRS VTNPEPGVSR
201: LGGKRLFSVL AAPKLNGAES LSSLKLRESA LVGRRYESSA AAVDSSDAPP AEKFEYQAEV NRLMDLIVHS LYSNKEVFLR ELVSNASDAL DKLRYLSVTD
301: PDLLKDGPEL DIRIQTDKDN GIITITDSGI GMTRQELVDS LGTIASSGTA KFLKTLKESQ EANVDSNLIG QFGVGFYSAF LVSDKVAVST KSPKSEKQYV
401: WEAEAESNSY TIREETDPEK LIPRGTRLTL YLKRDDKGFA HPERIQKLLK NYSQFVSFPI YTWQEKGFTK EVEVDEDPAE VKTEGDGEPK KEVKKKTKTV
501: VEKYWDWELT NETQPIWLRT PKEVSTEEYN EFYKKTFNEY LDPLASSHFT TEGEVEFRSI LYVPATKKED ITDRKTKNIR LYVKRVFISD DFDGELFPRY
601: LSFVKGVVDS NDLPLNVSRE ILQESRIVRI MRKRLVRKAF DMILGISCSE NRDDYEAFWE NYGKFLKLGC MEDKENHKRI APLLRFFSSQ SNEELISLDE
701: YVESMKPEQK AIYYIAGDSL SSAKNAPFLE KLNEMGYEVL LLIDPMDEVS LTNLNSYKDK SFVDISKEDL DLGDKNEERE KEMKQEYSQT CDWIKKRLGE
801: RVARVDVSNR LSSSPCVLVA AKFGWSANME RLMRAQSIGD TSSLDFMRSR KVFEINPEHE IIKRLNAACR INPDDPEALK AIDILFETSM ISSGFTPDNP
901: TDLSGKIYDM MSTAMAGKWA SQPQPAQPSQ QPAAPSSSEP EPLEAEVVEP VEAGQQK

Best Arabidopsis Sequence Match ( AT3G07770.2 )
(BLAST)

001: MIRLSKRSVS TLLRSGNQSF RIAAAASTSR SSPSATDVKR SDTESRWYSS LTNGQSKNSG SFAQLNMKTN WFMGYRNESS AAASDSSSQA PPPAEKFEYQ
101: AEVSRLMDLI VNSLYSNKEV FLRELISNAS DALDKLRYLS VTNPELSKDA PDLDIRIYAD KENGIITLTD SGIGMTRQEL VDCLGTIAQS GTAKFMKALK
201: DSKDAGGDNN LIGQFGVGFY SAFLVADRVI VSTKSPKSDK QYVWEGEANS SSFTIQEDTD PQSLIPRGTR ITLHLKQEAK NFADPERIQK LVKNYSQFVS
301: FPIYTWQEKG YTKEVEVEDD PTETKKDDQD DQTEKKKKTK KVVERYWDWE LTNETQPIWL RNPKEVTTAE YNEFYRKAFN EYLDPLASSH FTTEGEVEFR
401: SILYVPPVSP SGKDDIVNQK TKNIRLYVKR VFISDDFDGE LFPRYLSFVK GVVDSHDLPL NVSREILQES RIVRIMKKRL VRKAFDMILG ISLSENREDY
501: EKFWDNFGKH LKLGCIEDRE NHKRIAPLLR FFSSQSENDM ISLDEYVENM KPEQKAIYFI ASDSITSAKN APFLEKMLEK GLEVLYLVEP IDEVAVQSLK
601: AYKEKDFVDI SKEDLDLGDK NEEKEAAVKK EFGQTCDWIK KRLGDKVASV QISNRLSSSP CVLVSGKFGW SANMERLMKA QSTGDTISLD YMKGRRVFEI
701: NPDHSIIKNI NAAYNSNPND EDAMRAIDLM YDAALVSSGF TPDNPAELGG KIYEMMDVAL SGKWSSPEVQ PQQQQMAHSH DAETFEAEVV EPVEVDGKK

Arabidopsis Description

HSP90-6Heat shock protein 90-6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JFN3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.