CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040027.1-P	Field mustard	mitochondrion	99.88	99.88
CDY35962	Canola	mitochondrion	94.15	94.27
CDY28017	Canola	mitochondrion	90.55	92.5
AT3G07770.3	Thale cress	mitochondrion	89.18	89.74
KRH74006	Soybean	mitochondrion	75.75	76.99
KRH14117	Soybean	mitochondrion	75.87	76.54
PGSC0003DMT400015734	Potato	mitochondrion	75.5	76.45
Solyc07g047790.2.1	Tomato	mitochondrion, nucleus, plastid	74.75	75.69
GSMUA_Achr10P...	Banana	mitochondrion	71.64	72.91
VIT_12s0057g00670.t01	Wine grape	cytosol	76.49	72.61
Os12t0514500-01	Rice	mitochondrion	69.53	68.93
Zm00001d035285_P003	Maize	extracellular	68.28	68.28
KXG23570	Sorghum	mitochondrion, plastid	68.41	68.15
Zm00001d041719_P001	Maize	mitochondrion	68.53	67.77
TraesCS5A01G101900.2	Wheat	mitochondrion	68.66	67.65
TraesCS5B01G106300.1	Wheat	mitochondrion	68.91	67.31
CDY66279	Canola	mitochondrion	35.7	65.53
HORVU5Hr1G027910.13	Barley	plastid	68.53	63.48
CDY33122	Canola	plastid	61.07	62.71
CDX83528	Canola	plastid	60.95	62.58
CDY48069	Canola	plastid	60.57	61.88
CDY04167	Canola	plastid	57.96	60.99
CDX99788	Canola	plastid	50.87	59.45
CDY66280	Canola	cytosol	16.17	58.3
TraesCS5D01G113700.1	Wheat	mitochondrion, plastid	69.03	57.99
CDY06544	Canola	cytosol	6.59	46.09
CDY11961	Canola	cytosol	20.4	45.05
CDY27839	Canola	cytosol	37.81	43.12
CDY11967	Canola	cytosol	30.22	42.19
CDY36772	Canola	cytosol	18.66	41.32
CDY36776	Canola	cytosol	18.66	41.32
CDY50297	Canola	plastid	32.34	40.88
CDY20742	Canola	cytosol	27.74	40.47
CDY64982	Canola	cytosol	27.61	40.44
CDY50296	Canola	cytosol	3.11	40.32
CDY06551	Canola	cytosol	28.73	40.31
CDY36807	Canola	cytosol	28.73	40.17
CDY11921	Canola	cytosol	26.74	40.04
CDY08910	Canola	endoplasmic reticulum	38.31	39.34
CDY03477	Canola	endoplasmic reticulum	40.05	39.17
CDY34264	Canola	endoplasmic reticulum	39.8	38.93
CDX92620	Canola	endoplasmic reticulum	38.18	38.76
CDY24830	Canola	endoplasmic reticulum	39.3	38.58
CDY22598	Canola	cytosol	21.89	37.05
CDY10992	Canola	endoplasmic reticulum	39.93	36.85
CDY36771	Canola	cytosol	6.09	33.33
CDY36775	Canola	cytosol	5.97	32.65
CDY11962	Canola	cytosol	5.6	31.03
CDY06545	Canola	cytosol	2.11	27.87
CDY06546	Canola	cytosol	1.62	17.57

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
GO:A0A078GAR7	UniProt:A0A078GAR7	EnsemblPlants:CDY22132	ProteinID:CDY22132	ProteinID:CDY22132.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00018522001	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196
HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298
PANTHER:PTHR11528	PANTHER:PTHR11528:SF41	InterPro:Ribosomal_S5_D2-typ_fold	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874
UniParc:UPI0004EE313F	SEG:seg	:	:	:	:

Description

BnaC01g39690DBnaC01g39690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAR7]

Coordinates

chrLK032128:+:56854..61737

Molecular Weight (calculated)

91078.2 Da

IEP (calculated)

5.125

GRAVY (calculated)

-0.602

Length

804 amino acids

Sequence
(BLAST)

001: MLRLSKRSVS TLLRSGDRSF RVAAAAGTSI HRSSPSSTDA KRGEAESRWY SSLTNGKCRR SESLAHLNMK ANWFMGYRNE SSAAASDSSS QAPPPPPVEK
101: YEYQAEVSRL MDLIVNSLYS NKEVFLRELI SNASDALDKL RYLSVTDPDL SKDAADLDIR IYADKENGVI TLTDSGIGMT RQELVDCLGT IAQSGTAKFL
201: TALKDNKDAG GDNNLIGQFG VGFYSAFLVA DRVTVSTKSP KSDKQYVWEG EEGSSSYTIK EETDPQLIIP RGTRITLHLK PDYKGFADPE RVQKLVKNYS
301: QFVSFPIYTW QEKGYTKEVE VDDDSAESKQ DNQDDQAERK KKTKKVVERY WDWELTNETQ PIWLRNSKEV TTEEYNEFYR KTFNEYLDPL ASSHFTTEGE
401: VEFRSILYVP PVSPMGKDDV VNQKTKNIRL YVKRVFISDD FDGELFPRYL SFIKGVVDSH DLPLNVSREI LQESRIVRIM KKRLVKKAFD MILGISLSEN
501: REDYEKFWDN FGKHLKLGCI EDRENHKRLA PLLRFFSSQS ENDMISLDEY VENMKAEQKA IYYVASDSIT SAKNAPFLEK LLEKELEVLY LVEPIDEVAI
601: QSLKSYKDKD FIDISKEDLD LGKCDKNEEK EAAAKKEFGQ TCDWIKKRLG DKVASVQISS RLSSSPCVLV SGKFGWSANM ERLMKAQSAG DTTSLEFMKG
701: RRVFEINPDH SIIKNINAAY KSNPNDEDAM KAIDLMYDAA LVSSGFTPEN PAELGGKIYE MMDTALSGKW SSPEAQPQQH MAQSHNAELL EAEVVEPVEV
801: DGKK

Best Arabidopsis Sequence Match ( AT3G07770.2 )
(BLAST)

001: MIRLSKRSVS TLLRSGNQSF RIAAAASTSR SSPSATDVKR SDTESRWYSS LTNGQSKNSG SFAQLNMKTN WFMGYRNESS AAASDSSSQA PPPAEKFEYQ
101: AEVSRLMDLI VNSLYSNKEV FLRELISNAS DALDKLRYLS VTNPELSKDA PDLDIRIYAD KENGIITLTD SGIGMTRQEL VDCLGTIAQS GTAKFMKALK
201: DSKDAGGDNN LIGQFGVGFY SAFLVADRVI VSTKSPKSDK QYVWEGEANS SSFTIQEDTD PQSLIPRGTR ITLHLKQEAK NFADPERIQK LVKNYSQFVS
301: FPIYTWQEKG YTKEVEVEDD PTETKKDDQD DQTEKKKKTK KVVERYWDWE LTNETQPIWL RNPKEVTTAE YNEFYRKAFN EYLDPLASSH FTTEGEVEFR
401: SILYVPPVSP SGKDDIVNQK TKNIRLYVKR VFISDDFDGE LFPRYLSFVK GVVDSHDLPL NVSREILQES RIVRIMKKRL VRKAFDMILG ISLSENREDY
501: EKFWDNFGKH LKLGCIEDRE NHKRIAPLLR FFSSQSENDM ISLDEYVENM KPEQKAIYFI ASDSITSAKN APFLEKMLEK GLEVLYLVEP IDEVAVQSLK
601: AYKEKDFVDI SKEDLDLGDK NEEKEAAVKK EFGQTCDWIK KRLGDKVASV QISNRLSSSP CVLVSGKFGW SANMERLMKA QSTGDTISLD YMKGRRVFEI
701: NPDHSIIKNI NAAYNSNPND EDAMRAIDLM YDAALVSSGF TPDNPAELGG KIYEMMDVAL SGKWSSPEVQ PQQQQMAHSH DAETFEAEVV EPVEVDGKK

Arabidopsis Description

HSP90-6Heat shock protein 90-6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JFN3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.