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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY20742 Canola cytosol 99.45 99.09
CDY11921 Canola cytosol 94.54 96.65
CDY36775 Canola cytosol 25.68 95.92
CDY36776 Canola cytosol 63.02 95.32
CDY36772 Canola cytosol 63.02 95.32
CDY36771 Canola cytosol 25.5 95.24
CDY06551 Canola cytosol 98.72 94.59
CDY11962 Canola cytosol 24.95 94.48
CDY36807 Canola cytosol 97.27 92.87
CDY11961 Canola cytosol 58.29 87.91
CDY11967 Canola cytosol 92.17 87.85
Bra035599.1-P Field mustard cytosol 88.16 85.97
CDY06544 Canola cytosol 17.49 83.48
CDY06545 Canola cytosol 8.38 75.41
GSMUA_Achr3P10970_001 Banana cytosol, plasma membrane 76.32 71.02
Solyc07g065840.2.1 Tomato nucleus, plastid 88.71 69.67
KRH46427 Soybean nucleus 88.71 69.67
PGSC0003DMT400037336 Potato cytosol 88.52 69.53
GSMUA_Achr9P12680_001 Banana cytosol 70.13 69.0
Solyc12g015880.1.1 Tomato nucleus 87.8 68.96
KRG98439 Soybean nucleus 88.16 68.95
GSMUA_Achr3P04010_001 Banana cytosol 70.67 68.92
EES14299 Sorghum cytosol 87.61 68.91
PGSC0003DMT400057003 Potato cytosol 87.61 68.81
PGSC0003DMT400076601 Potato cytosol 87.61 68.81
VIT_00s0194g00030.t01 Wine grape cytosol 87.61 68.81
TraesCS5B01G258900.2 Wheat golgi 87.43 68.57
TraesCS5D01G268000.1 Wheat cytosol 87.43 68.57
Zm00001d006008_P001 Maize plastid 87.07 68.48
TraesCS5A01G260600.3 Wheat nucleus 87.25 68.43
EER96954 Sorghum cytosol 87.07 68.38
Zm00001d031332_P007 Maize cytosol 83.97 68.3
Zm00001d052855_P001 Maize plasma membrane 86.7 68.1
EER99075 Sorghum cytosol 86.52 67.95
CDY50296 Canola cytosol 7.65 67.74
VIT_19s0015g01090.t01 Wine grape cytosol 86.7 67.61
Os09t0482600-01 Rice cytosol 85.61 67.24
Os09t0482400-01 Rice nucleus 85.61 67.24
Os09t0482100-01 Rice nucleus 85.61 67.24
TraesCS7D01G241100.1 Wheat golgi 85.43 67.0
TraesCS7A01G242200.1 Wheat cytosol, plastid, unclear 85.25 66.86
TraesCS7B01G149200.1 Wheat golgi 85.06 66.71
HORVU5Hr1G072420.2 Barley plasma membrane 87.07 65.48
CDY22598 Canola cytosol 56.47 65.26
GSMUA_Achr11P... Banana cytosol 68.49 65.16
GSMUA_Achr10P... Banana cytosol, plasma membrane, unclear 73.77 64.8
CDY27839 Canola cytosol 82.7 64.4
Os08t0500700-01 Rice extracellular, plasma membrane, vacuole 81.24 64.27
Zm00001d020898_P002 Maize cytosol 79.96 61.92
HORVU7Hr1G049370.2 Barley cytosol, mitochondrion, plastid 66.3 55.66
CDY50297 Canola plastid 63.57 54.87
CDY06546 Canola cytosol 6.74 50.0
GSMUA_Achr3P04050_001 Banana cytosol 8.74 37.5
CDX92620 Canola endoplasmic reticulum 46.63 32.32
CDY24830 Canola endoplasmic reticulum 47.54 31.87
CDY08910 Canola endoplasmic reticulum 45.17 31.67
CDY03477 Canola endoplasmic reticulum 47.36 31.63
CDY66279 Canola mitochondrion 25.14 31.51
CDY34264 Canola endoplasmic reticulum 46.99 31.39
TraesCS5D01G258900.2 Wheat plastid 43.35 30.47
CDX83528 Canola plastid 43.17 30.27
CDY48069 Canola plastid 43.17 30.11
CDY33122 Canola plastid 42.62 29.89
CDY10992 Canola endoplasmic reticulum 47.36 29.85
CDY04167 Canola plastid 40.98 29.45
CDY28017 Canola mitochondrion 40.62 28.34
CDY66280 Canola cytosol 11.48 28.25
CDY35962 Canola mitochondrion 40.8 27.9
CDY22132 Canola mitochondrion 40.44 27.61
CDX99788 Canola plastid 33.52 26.74
Os09t0534600-01 Rice endoplasmic reticulum, golgi, plasma membrane 13.66 17.4
TraesCS5D01G258800.1 Wheat cytosol 0.55 1.2
Protein Annotations
Gene3D:1.20.120.790MapMan:19.1.6.1Gene3D:3.30.230.80Gene3D:3.30.565.10Gene3D:3.40.50.11260GO:A0A078JHU4
UniProt:A0A078JHU4EnsemblPlants:CDY64982ProteinID:CDY64982ProteinID:CDY64982.1ncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006457GO:GO:0006950
GO:GO:0008150GO:GO:0009987GO:GO:0051082EnsemblPlantsGene:GSBRNA2T00043973001InterPro:HATPase_CInterPro:HATPase_C_sf
InterPro:HSP90_CInterPro:Heat_shock_protein_90_CSInterPro:Hsp90_NInterPro:Hsp90_famInterPro:IPR036890InterPro:IPR037196
PFAM:PF00183PFAM:PF02518PIRSF:PIRSF002583PRINTS:PR00775ScanProsite:PS00298PANTHER:PTHR11528
PANTHER:PTHR11528:SF74InterPro:Ribosomal_S5_D2-typ_foldSMART:SM00387SUPFAM:SSF110942SUPFAM:SSF54211SUPFAM:SSF55874
UniParc:UPI0004EE080FSEG:seg::::
Description
BnaA02g35440DBnaA02g35440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHU4]
Coordinates
chrLK034617:-:11835..14304
Molecular Weight (calculated)
62359.9 Da
IEP (calculated)
4.544
GRAVY (calculated)
-0.538
Length
549 amino acids
Sequence
(BLAST)
001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KANNTLTIVD SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VADKVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGENNAS SQGGSVGTVE KEISDDEDEE EKKDEEGKVE
201: EVDEEKEKKK KKIKEVSHEW ELVNKQKPIW MRKPEEITKE EYAAFYKSLS NDWEEHLAVK HFSVEGQLEF KAVLFVPKRA PFDLFDTKKK PNNIKLYVRR
301: VFIMDNCEDI IPEWLGFQNK ILKVIRKNLV KKCLELFFEI AENKEDYNKT KIAELLRQND IFYITGESKK AVENSPFLEK LKKKGYEVLY MVDAIDEYAI
401: GQLKEFEGKK LVSATKEGLK LDESEDEKKK KEELKEKFEA LCKVIKDVLG DKVEKVIVSD RVVDSPCCLV TGEYGWTANM ERIMKAQALR DSSMAGYILD
501: EPNTFGNRIH RMLKLGLSID EDDAVEGDAE MPPLEDDADA EGSKMEEVD
Best Arabidopsis Sequence Match ( AT5G52640.1 )
(BLAST)
001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIRLVPD KSNKTLSIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALQ AGADVSMIGQ FGVGFYSAYL VAEKVVVTTK HNDDEQYVWE SQAGGSFTVT RDVDGEPLGR GTKITLFLKD DQLEYLEERR LKDLVKKHSE
201: FISYPIYLWT EKTTEKEISD DEDEDEPKKE NEGEVEEVDE EKEKDGKKKK KIKEVSHEWE LINKQKPIWL RKPEEITKEE YAAFYKSLTN DWEDHLAVKH
301: FSVEGQLEFK AILFVPKRAP FDLFDTRKKL NNIKLYVRRV FIMDNCEELI PEYLSFVKGV VDSDDLPLNI SRETLQQNKI LKVIRKNLVK KCIEMFNEIA
401: ENKEDYTKFY EAFSKNLKLG IHEDSQNRGK IADLLRYHST KSGDEMTSFK DYVTRMKEGQ KDIFYITGES KKAVENSPFL ERLKKRGYEV LYMVDAIDEY
501: AVGQLKEYDG KKLVSATKEG LKLEDETEEE KKKREEKKKS FENLCKTIKE ILGDKVEKVV VSDRIVDSPC CLVTGEYGWT ANMERIMKAQ ALRDSSMSGY
601: MSSKKTMEIN PDNGIMEELR KRAEADKNDK SVKDLVMLLY ETALLTSGFS LDEPNTFAAR IHRMLKLGLS IDEDENVEED GDMPELEEDA AEESKMEEVD
Arabidopsis Description
HSP90-1Heat shock protein 90-1 [Source:UniProtKB/Swiss-Prot;Acc:P27323]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.