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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • endoplasmic reticulum 4
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol
PProwler:secretory
TargetP:secretory
YLoc:endoplasmic reticulum
cytoskeleton: 22840326
vacuole: 18557835
plastid: 21433289
nucleus: 23777608
plasma membrane: 27800704
extracellular: 28232208
gfp PMID: 22840326 doi
J Krtková, A Zimmermann, K Schwarzerová, P Nick
Department of Experimental Plant Biology, Charles University in Prague, Vini?ná 5, 128 44 Prague 2, Czech Republic. akcni.krtecek@post.cz
msms PMID: 23777608 doi
H Mujahid, F Tan, J Zhang, BR Nallamilli, K Pendarvis, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 18557835 doi
SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis
Department of Biology Area 9, University of York, York YO10 5DD, UK.
msms PMID: 21433289 doi
S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky
Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0501800-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G56010.1 Os01t0501800-01 AT5G66570.1 16619024
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES14299 Sorghum cytosol 93.08 92.55
Os09t0482600-01 Rice cytosol 92.94 92.27
Os09t0482400-01 Rice nucleus 92.94 92.27
Os09t0482100-01 Rice nucleus 92.8 92.13
CDY22598 Canola cytosol 61.96 90.53
TraesCS5D01G268000.1 Wheat cytosol 90.63 89.86
TraesCS5B01G258900.2 Wheat golgi 90.63 89.86
TraesCS7A01G242200.1 Wheat cytosol, plastid, unclear 90.49 89.71
TraesCS5A01G260600.3 Wheat nucleus 90.49 89.71
TraesCS7D01G241100.1 Wheat golgi 90.49 89.71
TraesCS7B01G149200.1 Wheat golgi 90.35 89.57
GSMUA_Achr9P12680_001 Banana cytosol 71.76 89.25
Zm00001d020898_P002 Maize cytosol 91.07 89.14
GSMUA_Achr10P... Banana cytosol, plasma membrane, unclear 80.26 89.12
GSMUA_Achr3P10970_001 Banana cytosol, plasma membrane 75.5 88.81
GSMUA_Achr3P04010_001 Banana cytosol 71.76 88.45
GSMUA_Achr11P... Banana cytosol 73.34 88.21
Solyc12g015880.1.1 Tomato nucleus 88.76 88.13
Solyc07g065840.2.1 Tomato nucleus, plastid 88.33 87.7
Bra035593.1-P Field mustard cytosol 84.73 87.5
Bra028924.1-P Field mustard cytosol 88.04 87.41
Bra028952.1-P Field mustard cytosol 87.75 87.12
AT5G56010.1 Thale cress cytosol 87.46 86.84
Bra028948.1-P Field mustard cytosol 87.18 86.68
Bra035599.1-P Field mustard cytosol 70.17 86.5
CDY36775 Canola cytosol 18.3 86.39
HORVU5Hr1G072420.2 Barley plasma membrane 90.35 85.89
CDY36771 Canola cytosol 18.16 85.71
AT5G56000.1 Thale cress cytosol 86.02 85.41
CDY11967 Canola cytosol 70.61 85.07
CDY11962 Canola cytosol 17.72 84.83
AT5G56030.2 Thale cress cytosol 87.75 83.65
HORVU7Hr1G049370.2 Barley cytosol, mitochondrion, plastid 78.82 83.64
CDY11961 Canola cytosol 43.08 82.14
CDY36807 Canola cytosol 67.72 81.74
CDY64982 Canola cytosol 64.27 81.24
CDY06551 Canola cytosol 67.0 81.15
CDY20742 Canola cytosol 64.41 81.13
CDY11921 Canola cytosol 62.25 80.45
CDY36776 Canola cytosol 39.48 75.48
CDY36772 Canola cytosol 39.48 75.48
Os04t0107900-02 Rice cytosol 25.65 71.49
KRH50203 Soybean cytosol 23.63 53.95
Os06t0716700-02 Rice plasma membrane 48.56 41.5
Os09t0474300-01 Rice plastid 33.72 35.78
Os12t0514500-01 Rice mitochondrion 39.91 34.16
Os09t0534600-01 Rice endoplasmic reticulum, golgi, plasma membrane 14.99 24.13
Protein Annotations
Gene3D:1.20.120.790MapMan:19.1.6.1Gene3D:3.30.230.80Gene3D:3.30.565.10Gene3D:3.30.70.2140Gene3D:3.40.50.11260
UniProt:A0A0P0XIF8ProteinID:BAT06112.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0006457GO:GO:0006950GO:GO:0008150GO:GO:0009987
GO:GO:0051082InterPro:HATPase_CInterPro:HATPase_C_sfInterPro:HSP90_CInterPro:Hsp90_NInterPro:Hsp90_fam
InterPro:IPR036890InterPro:IPR037196HAMAP:MF_00505EnsemblPlantsGene:Os08g0500700EnsemblPlants:Os08t0500700-01PFAM:PF00183
PFAM:PF02518PIRSF:PIRSF002583PRINTS:PR00775PANTHER:PTHR11528PANTHER:PTHR11528:SF74InterPro:Ribosomal_S5_D2-typ_fold
SUPFAM:SSF110942SUPFAM:SSF54211SUPFAM:SSF55874UniParc:UPI0000DD9584SEG:seg:
Description
HEAT SHOCK PROTEIN 82ASimilar to Heat shock protein 82. (Os08t0500700-01)
Coordinates
chr8:-:24719203..24723184
Molecular Weight (calculated)
79621.0 Da
IEP (calculated)
4.767
GRAVY (calculated)
-0.549
Length
694 amino acids
Sequence
(BLAST)
001: LNFWCGNIIK LLSDSELELL AAFIQNRPLI LCFCVLQALD KIRFESLTDK SKLDAQPELF IHIVPDKASN TLSIIDSGIG MTKSDLVNNL GTIARSGTKE
101: FMEALAAGAD VSMIGQFGVG FYSAYLVAER VVVTTKHNDD EQYVWESQAG GSFTVTRDTS GEQLGRGTKI TLYLKDDQLE YLEERRLKDL IKKHSEFISY
201: PISLWTEKTT EKEISDDEDE EEKKDAEEGK VEDVDEEKEE KEKKKKKIKE VSHEWSLVNK QKPIWMRKPE EITKEEYAAF YKSLTNDWEE HLAVKHFSVE
301: GQLEFKAVLF VPKRAPFDLF DTRKKLNNIK LYVRRVFIMD NCEELIPEWL SFVKGIVDSE DLPLNISREM LQQNKILKVI RKNLVKKCVE LFFEIAENKE
401: DYNKFYEAFS KNLKLGIHED STNRNKIAEL LRYHSTKSGD ELTSLKDYVT RMKEGQNDIY YITGESKKAV ENSPFLEKLK KKGYEVLYMV DAIDEYAVGQ
501: LKEFEGKKLV SATKEGLKLD ESEDEKKRKE ELKEKFEGLC KVIKEVLGDK VEKVVVSDRV VDSPCCLVTG EYGWTANMER IMKAQALRDS SMAGYMSSKK
601: TMEINPENAI MEELRKRADA DKNDKSVKDL VLLLFETALL TSGFSLDDPN TFGSRIHRML KLGLSIDEDE TAEADTDMPP LEDDAGESKM EEVD
Best Arabidopsis Sequence Match ( AT5G56030.2 )
(BLAST)
001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DVRSLSLSTL LYTCVSRLID LADGSVDLGL ALDKIRFESL TDKSKLDGQP ELFIHIIPDK
101: TNNTLTIIDS GIGMTKADLV NNLGTIARSG TKEFMEALAA GADVSMIGQF GVGFYSAYLV ADKVVVTTKH NDDEQYVWES QAGGSFTVTR DTSGETLGRG
201: TKMVLYLKED QLEYLEERRL KDLVKKHSEF ISYPISLWIE KTIEKEISDD EEEEEKKDEE GKVEEVDEEK EKEEKKKKKI KEVSHEWDLV NKQKPIWMRK
301: PEEINKEEYA AFYKSLSNDW EEHLAVKHFS VEGQLEFKAI LFVPKRAPFD LFDTKKKPNN IKLYVRRVFI MDNCEDIIPE YLGFVKGIVD SEDLPLNISR
401: ETLQQNKILK VIRKNLVKKC LELFFEIAEN KEDYNKFYEA FSKNLKLGIH EDSQNRTKIA ELLRYHSTKS GDELTSLKDY VTRMKEGQND IFYITGESKK
501: AVENSPFLEK LKKKGIEVLY MVDAIDEYAI GQLKEFEGKK LVSATKEGLK LDETEDEKKK KEELKEKFEG LCKVIKDVLG DKVEKVIVSD RVVDSPCCLV
601: TGEYGWTANM ERIMKAQALR DSSMAGYMSS KKTMEINPEN SIMDELRKRA DADKNDKSVK DLVLLLFETA LLTSGFSLDE PNTFGSRIHR MLKLGLSIDD
701: DDAVEADAEM PPLEDDADAE GSKMEEVD
Arabidopsis Description
HSP81-2Heat shock protein 81-2 [Source:UniProtKB/TrEMBL;Acc:F4K6B6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.