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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY06545 Canola cytosol 10.74 83.61
CDY11962 Canola cytosol 23.58 77.24
CDY36775 Canola cytosol 23.58 76.19
CDY36771 Canola cytosol 23.37 75.51
HORVU7Hr1G049370.2 Barley cytosol, mitochondrion, plastid 88.63 64.37
CDY11967 Canola cytosol 76.21 62.85
EES14299 Sorghum cytosol 91.58 62.32
Solyc12g015880.1.1 Tomato nucleus 91.58 62.23
Os08t0500700-01 Rice extracellular, plasma membrane, vacuole 90.53 61.96
Solyc07g065840.2.1 Tomato nucleus, plastid 90.95 61.8
PGSC0003DMT400037336 Potato cytosol 90.95 61.8
Zm00001d006008_P001 Maize plastid 90.74 61.75
PGSC0003DMT400076601 Potato cytosol 90.74 61.66
PGSC0003DMT400057003 Potato cytosol 90.74 61.66
EER96954 Sorghum cytosol 90.53 61.52
Zm00001d052855_P001 Maize plasma membrane 90.53 61.52
VIT_00s0194g00030.t01 Wine grape cytosol 90.32 61.37
Zm00001d031332_P007 Maize cytosol 87.16 61.33
TraesCS5A01G260600.3 Wheat nucleus 90.32 61.29
TraesCS5B01G258900.2 Wheat golgi 90.32 61.29
TraesCS5D01G268000.1 Wheat cytosol 90.32 61.29
KRH46427 Soybean nucleus 90.11 61.23
KRG98439 Soybean nucleus 90.32 61.11
Os09t0482400-01 Rice nucleus 89.89 61.09
Os09t0482600-01 Rice cytosol 89.89 61.09
EER99075 Sorghum cytosol 89.89 61.09
Os09t0482100-01 Rice nucleus 89.68 60.94
Zm00001d020898_P002 Maize cytosol 89.89 60.23
TraesCS7D01G241100.1 Wheat golgi 88.63 60.14
TraesCS7B01G149200.1 Wheat golgi 88.63 60.14
TraesCS7A01G242200.1 Wheat cytosol, plastid, unclear 88.63 60.14
VIT_19s0015g01090.t01 Wine grape cytosol 89.05 60.09
GSMUA_Achr3P10970_001 Banana cytosol, plasma membrane 73.47 59.15
GSMUA_Achr10P... Banana cytosol, plasma membrane, unclear 77.68 59.04
HORVU5Hr1G072420.2 Barley plasma membrane 90.32 58.77
GSMUA_Achr11P... Banana cytosol 71.37 58.75
CDY36807 Canola cytosol 70.74 58.43
CDY06551 Canola cytosol 69.89 57.94
CDY50297 Canola plastid 77.47 57.86
CDY27839 Canola cytosol 85.47 57.59
CDY06546 Canola cytosol 8.84 56.76
CDY64982 Canola cytosol 65.26 56.47
CDY20742 Canola cytosol 65.47 56.44
CDY11921 Canola cytosol 62.95 55.68
CDY11961 Canola cytosol 41.05 53.57
GSMUA_Achr3P04050_001 Banana cytosol 14.32 53.12
GSMUA_Achr3P04010_001 Banana cytosol 62.95 53.11
GSMUA_Achr9P12680_001 Banana cytosol 62.11 52.87
CDY36776 Canola cytosol 35.16 46.01
CDY36772 Canola cytosol 35.16 46.01
CDY66280 Canola cytosol 15.79 33.63
CDY08910 Canola endoplasmic reticulum 46.11 27.97
CDX92620 Canola endoplasmic reticulum 45.47 27.27
CDY24830 Canola endoplasmic reticulum 46.53 26.98
CDY03477 Canola endoplasmic reticulum 46.32 26.76
CDY34264 Canola endoplasmic reticulum 45.89 26.52
CDY10992 Canola endoplasmic reticulum 45.89 25.03
CDX83528 Canola plastid 41.05 24.9
CDY48069 Canola plastid 41.05 24.78
CDY33122 Canola plastid 40.63 24.65
CDX99788 Canola plastid 35.37 24.42
TraesCS5D01G258900.2 Wheat plastid 40.0 24.33
CDY04167 Canola plastid 38.11 23.69
CDY35962 Canola mitochondrion 37.68 22.29
CDY22132 Canola mitochondrion 37.05 21.89
CDY06544 Canola cytosol 5.26 21.74
CDY28017 Canola mitochondrion 36.0 21.73
CDY66279 Canola mitochondrion 19.79 21.46
Os09t0534600-01 Rice endoplasmic reticulum, golgi, plasma membrane 14.74 16.24
CDY50296 Canola cytosol 0.21 1.61
TraesCS5D01G258800.1 Wheat cytosol 0.0 0.0
Protein Annotations
Gene3D:1.20.120.790MapMan:19.1.6.1Gene3D:3.30.230.80Gene3D:3.30.565.10Gene3D:3.40.50.11260GO:A0A078GD98
UniProt:A0A078GD98EnsemblPlants:CDY22598ProteinID:CDY22598ProteinID:CDY22598.1ncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006457GO:GO:0006950
GO:GO:0008150GO:GO:0009987GO:GO:0051082EnsemblPlantsGene:GSBRNA2T00019254001InterPro:HATPase_C_sfInterPro:HSP90_C
InterPro:Hsp90_famInterPro:IPR036890InterPro:IPR037196PFAM:PF00183PIRSF:PIRSF002583PANTHER:PTHR11528
PANTHER:PTHR11528:SF74InterPro:Ribosomal_S5_D2-typ_foldSUPFAM:SSF110942SUPFAM:SSF54211SUPFAM:SSF55874UniParc:UPI0004EDAF61
SEG:seg:::::
Description
BnaC05g24360DBnaC05g24360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GD98]
Coordinates
chrLK032133:-:578193..579729
Molecular Weight (calculated)
55278.4 Da
IEP (calculated)
5.576
GRAVY (calculated)
-0.661
Length
475 amino acids
Sequence
(BLAST)
001: MMLYVWESQA GGSFTVTRDT SRENLGRGTK MYLEERRLKD LVKKHSELIS YPISLWIEKS IEKEISDDED EEGKVEEVDE EKEKKKIKEV SHEWDLVNKQ
101: KPIWMRKPEE ITKEEYAAFY KSLSNDWEEQ LAVKHFSVEG QLEFKAIILF VPKRAPFDLF DTKKKPNNIK LYVRRVFIMD NCKDIIPEWL GFQNKILKVI
201: RKNLVKKCLE LFFEIAENKE DYNKFYEAFS KNMKLGIHED SQNRTKIAEL LRYHSTKSGD ELTSLKDYVT RMKEGQEDIF YTTGESKKEA VENSPFLEKL
301: KKKGYEVLYM VDAIDEYAIG QLKEFEGKKL VSATKEGLKL EESEDEKKKK EELKEKFEGL CKVIKDVLGD KVEKVIVSDR VVDSPCCLIT AQALRDSSMA
401: GYMSSKKTME INPENAITDE LRKRAEADKN DKSLKDLVLL LFETALLTSG FSLDEPNTFG SKIHRMLKLG LSIDD
Best Arabidopsis Sequence Match ( AT5G56030.1 )
(BLAST)
001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KTNNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VADKVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGETLGR GTKMVLYLKE DQLEYLEERR LKDLVKKHSE
201: FISYPISLWI EKTIEKEISD DEEEEEKKDE EGKVEEVDEE KEKEEKKKKK IKEVSHEWDL VNKQKPIWMR KPEEINKEEY AAFYKSLSND WEEHLAVKHF
301: SVEGQLEFKA ILFVPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCEDIIP EYLGFVKGIV DSEDLPLNIS RETLQQNKIL KVIRKNLVKK CLELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRTKI AELLRYHSTK SGDELTSLKD YVTRMKEGQN DIFYITGESK KAVENSPFLE KLKKKGIEVL YMVDAIDEYA
501: IGQLKEFEGK KLVSATKEGL KLDETEDEKK KKEELKEKFE GLCKVIKDVL GDKVEKVIVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL RDSSMAGYMS
601: SKKTMEINPE NSIMDELRKR ADADKNDKSV KDLVLLLFET ALLTSGFSLD EPNTFGSRIH RMLKLGLSID DDDAVEADAE MPPLEDDADA EGSKMEEVD
Arabidopsis Description
HSP81-2Heat shock protein 81-2 [Source:UniProtKB/TrEMBL;Acc:F4K6B6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.