Factsheet for GSMUA_Achr9P12680_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56010.1	GSMUA_AchrUn_...	AT5G66570.1	16619024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P04010_001	Banana	cytosol	98.39	97.51
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, unclear	89.25	79.68
GSMUA_Achr3P04050_001	Banana	cytosol	17.92	78.12
GSMUA_Achr11P...	Banana	cytosol	79.93	77.3
GSMUA_Achr3P10970_001	Banana	cytosol, plasma membrane	81.36	76.95
CDY11961	Canola	cytosol	49.46	75.82
Os09t0482600-01	Rice	cytosol	94.44	75.39
Os09t0482400-01	Rice	nucleus	94.44	75.39
Os09t0482100-01	Rice	nucleus	94.44	75.39
EES14299	Sorghum	cytosol	94.27	75.36
Zm00001d006008_P001	Maize	plastid	93.73	74.93
Zm00001d052855_P001	Maize	plasma membrane	93.55	74.68
EER96954	Sorghum	cytosol	93.55	74.68
Zm00001d031332_P007	Maize	cytosol	90.32	74.67
EER99075	Sorghum	cytosol	93.37	74.53
TraesCS5B01G258900.2	Wheat	golgi	92.65	73.86
TraesCS5D01G268000.1	Wheat	cytosol	92.65	73.86
TraesCS5A01G260600.3	Wheat	nucleus	92.47	73.71
Solyc12g015880.1.1	Tomato	nucleus	92.29	73.68
TraesCS7D01G241100.1	Wheat	golgi	92.11	73.43
TraesCS7A01G242200.1	Wheat	cytosol, plastid, unclear	91.94	73.29
TraesCS7B01G149200.1	Wheat	golgi	91.76	73.14
Solyc07g065840.2.1	Tomato	nucleus, plastid	91.04	72.68
Bra028924.1-P	Field mustard	cytosol	90.32	72.1
AT5G56010.1	Thale cress	cytosol	90.32	72.1
Bra035593.1-P	Field mustard	cytosol	86.74	72.02
Bra028952.1-P	Field mustard	cytosol	89.96	71.82
Os08t0500700-01	Rice	extracellular, plasma membrane, vacuole	89.25	71.76
Bra028948.1-P	Field mustard	cytosol	89.61	71.63
AT5G56000.1	Thale cress	cytosol	89.07	71.1
CDY36775	Canola	cytosol	18.64	70.75
HORVU5Hr1G072420.2	Barley	plasma membrane	92.29	70.55
CDY11967	Canola	cytosol	72.76	70.49
CDY64982	Canola	cytosol	69.0	70.13
CDY36771	Canola	cytosol	18.46	70.07
CDY11921	Canola	cytosol	67.2	69.83
CDY20742	Canola	cytosol	68.82	69.69
AT5G56030.2	Thale cress	cytosol	90.68	69.51
CDY36776	Canola	cytosol	45.16	69.42
CDY36772	Canola	cytosol	45.16	69.42
Zm00001d020898_P002	Maize	cytosol	87.99	69.25
CDY11962	Canola	cytosol	17.92	68.97
GSMUA_Achr8P19130_001	Banana	cytosol	71.68	68.73
Bra035599.1-P	Field mustard	cytosol	68.82	68.21
KRH33083	Soybean	cytosol	33.87	67.26
CDY06551	Canola	cytosol	68.46	66.67
CDY36807	Canola	cytosol	68.64	66.61
CDY22598	Canola	cytosol	52.87	62.11
PGSC0003DMT400014812	Potato	cytosol	26.7	62.08
HORVU7Hr1G049370.2	Barley	cytosol, mitochondrion, plastid	71.86	61.31
KRH50203	Soybean	cytosol	25.81	47.37
KRH05319	Soybean	endoplasmic reticulum	27.06	46.75
VIT_05s0062g00690.t01	Wine grape	cytosol	17.56	40.5
GSMUA_Achr1P07620_001	Banana	endoplasmic reticulum	51.08	34.97
GSMUA_Achr7P17770_001	Banana	endoplasmic reticulum	50.54	34.64
TraesCS5D01G258900.2	Wheat	plastid	45.34	32.39
GSMUA_Achr9P22700_001	Banana	plastid	46.06	32.29
GSMUA_Achr3P28100_001	Banana	plastid	45.7	31.95
GSMUA_Achr10P...	Banana	mitochondrion	43.91	31.01
Os09t0534600-01	Rice	endoplasmic reticulum, golgi, plasma membrane	15.05	19.49
TraesCS5D01G258800.1	Wheat	cytosol	0.54	1.2

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr9G12680_001	EnsemblPlants:GSMUA_Achr9P12680_001	EnsemblPlants:GSMUA_Achr9T12680_001
InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam
InterPro:IPR036890	InterPro:IPR037196	UniProt:M0TZS7	HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518
PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF74	InterPro:Ribosomal_S5_D2-typ_fold
SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	UniParc:UPI0002966962	SEG:seg

Description

Putative heat shock protein HSP 90-beta-3 [Source:GMGC_GENE;Acc:GSMUA_Achr9G12680_001]

Coordinates

chr9:+:8242588..8245617

Molecular Weight (calculated)

63609.5 Da

IEP (calculated)

4.467

GRAVY (calculated)

-0.497

Length

558 amino acids

Sequence
(BLAST)

001: MAAETETFAF QAEINQLLSL IINTFYSNKE IFLRELISNS SDALDKIRFE SLTDKSKLDA QPELFIHIVP DKATNTLSII DSGIGMTKSD LVNNLGTIAR
101: SGTKEFMEAL AAGADVSMIG QFGVGFYSAY LVAERVVVTT KHNDDEQYVW ESQAGGSFTV TRDTSGESLG RGTKITLFLK EDQLEYLEER RLKDLIKKHS
201: EFISYPISLW TEKTTEKEIS DDEDEEDKKD TEEGKVEDVD EEKEEKEKKK KKIKEEEYAA FYKSLTNDWE EHLAVRHFSV EGQLEFKAIL FVPKRAPFDL
301: FDTRKKLNNI KLYVRRVFIM DNCEEIIPEY LSFVKGIVDS EDLPLNISRE MLQQNKILKN SPFLEKLKKK GYEVLFMVDA IDEYAVGQLK EFEGKKLVSA
401: TKEGLKLDEI LGDKVEKVVV SDRVVDSPCC LVTGEYGWTA NMERIMKAQA LRDSSMAGYM SSKKTMEINP ENPIMEELRK RADADKNDKS VKDLTLLLFE
501: TALLTSGFSL DDPNTFGNRI HRMLKLGLSI DEDEKVEDTD MPTLEDADAE ESKMEEVD

Best Arabidopsis Sequence Match ( AT5G52640.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIRLVPD KSNKTLSIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALQ AGADVSMIGQ FGVGFYSAYL VAEKVVVTTK HNDDEQYVWE SQAGGSFTVT RDVDGEPLGR GTKITLFLKD DQLEYLEERR LKDLVKKHSE
201: FISYPIYLWT EKTTEKEISD DEDEDEPKKE NEGEVEEVDE EKEKDGKKKK KIKEVSHEWE LINKQKPIWL RKPEEITKEE YAAFYKSLTN DWEDHLAVKH
301: FSVEGQLEFK AILFVPKRAP FDLFDTRKKL NNIKLYVRRV FIMDNCEELI PEYLSFVKGV VDSDDLPLNI SRETLQQNKI LKVIRKNLVK KCIEMFNEIA
401: ENKEDYTKFY EAFSKNLKLG IHEDSQNRGK IADLLRYHST KSGDEMTSFK DYVTRMKEGQ KDIFYITGES KKAVENSPFL ERLKKRGYEV LYMVDAIDEY
501: AVGQLKEYDG KKLVSATKEG LKLEDETEEE KKKREEKKKS FENLCKTIKE ILGDKVEKVV VSDRIVDSPC CLVTGEYGWT ANMERIMKAQ ALRDSSMSGY
601: MSSKKTMEIN PDNGIMEELR KRAEADKNDK SVKDLVMLLY ETALLTSGFS LDEPNTFAAR IHRMLKLGLS IDEDENVEED GDMPELEEDA AEESKMEEVD

Arabidopsis Description

HSP90-1Heat shock protein 90-1 [Source:UniProtKB/Swiss-Prot;Acc:P27323]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.