Factsheet for Solyc12g015880.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
cytosol 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

nucleus: 25464976
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076601	Potato	cytosol	98.86	98.86
Solyc07g065840.2.1	Tomato	nucleus, plastid	95.99	95.99
KRH46427	Soybean	nucleus	93.71	93.71
VIT_00s0194g00030.t01	Wine grape	cytosol	93.71	93.71
KRG98439	Soybean	nucleus	93.85	93.45
GSMUA_Achr3P10970_001	Banana	cytosol, plasma membrane	78.83	93.39
Bra035593.1-P	Field mustard	cytosol	89.56	93.15
Bra028952.1-P	Field mustard	cytosol	93.13	93.13
AT5G56010.1	Thale cress	cytosol	92.99	92.99
CDY11961	Canola	cytosol	48.35	92.86
Bra028924.1-P	Field mustard	cytosol	92.85	92.85
EES14299	Sorghum	cytosol	92.7	92.84
Zm00001d006008_P001	Maize	plastid	92.42	92.55
Zm00001d031332_P007	Maize	cytosol	89.27	92.44
Bra028948.1-P	Field mustard	cytosol	92.27	92.41
Bra035599.1-P	Field mustard	cytosol	74.39	92.36
GSMUA_Achr9P12680_001	Banana	cytosol	73.68	92.29
EER96954	Sorghum	cytosol	92.27	92.27
CDY11967	Canola	cytosol	75.97	92.19
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, unclear	82.26	92.0
GSMUA_Achr11P...	Banana	cytosol	75.82	91.85
Os09t0482400-01	Rice	nucleus	91.85	91.85
AT5G56000.1	Thale cress	cytosol	91.85	91.85
Os09t0482600-01	Rice	cytosol	91.85	91.85
GSMUA_Achr3P04010_001	Banana	cytosol	73.96	91.83
VIT_19s0015g01090.t01	Wine grape	cytosol	92.42	91.76
Os09t0482100-01	Rice	nucleus	91.7	91.7
Zm00001d052855_P001	Maize	plasma membrane	91.7	91.7
CDY22598	Canola	cytosol	62.23	91.58
TraesCS5D01G268000.1	Wheat	cytosol	91.7	91.57
TraesCS5B01G258900.2	Wheat	golgi	91.7	91.57
EER99075	Sorghum	cytosol	91.56	91.56
TraesCS5A01G260600.3	Wheat	nucleus	91.56	91.43
TraesCS7D01G241100.1	Wheat	golgi	90.13	90.0
TraesCS7A01G242200.1	Wheat	cytosol, plastid, unclear	90.13	90.0
TraesCS7B01G149200.1	Wheat	golgi	89.99	89.86
AT5G56030.2	Thale cress	cytosol	93.28	89.56
Os08t0500700-01	Rice	extracellular, plasma membrane, vacuole	88.13	88.76
CDY36775	Canola	cytosol	18.6	88.44
CDY20742	Canola	cytosol	69.53	88.2
CDY36807	Canola	cytosol	72.39	88.0
CDY11921	Canola	cytosol	67.53	87.9
CDY64982	Canola	cytosol	68.96	87.8
CDY36771	Canola	cytosol	18.45	87.76
CDY06551	Canola	cytosol	71.82	87.61
HORVU5Hr1G072420.2	Barley	plasma membrane	91.42	87.53
Solyc06g036290.2.1	Tomato	nucleus, plastid	75.68	87.15
Solyc03g007890.2.1	Tomato	cytosol, extracellular, nucleus, plastid	87.12	87.12
CDY11962	Canola	cytosol	18.03	86.9
Zm00001d020898_P002	Maize	cytosol	87.41	86.18
CDY36772	Canola	cytosol	44.64	85.95
CDY36776	Canola	cytosol	44.64	85.95
HORVU7Hr1G049370.2	Barley	cytosol, mitochondrion, plastid	75.39	80.58
GSMUA_Achr3P04050_001	Banana	cytosol	13.02	71.09
KRG94627	Soybean	cytosol	29.9	67.2
Solyc04g081570.2.1	Tomato	plastid	50.93	43.84
TraesCS5D01G258900.2	Wheat	plastid	45.92	41.1
Solyc05g010670.2.1	Tomato	plastid	45.92	40.79
Solyc07g047790.2.1	Tomato	mitochondrion, nucleus, plastid	45.21	39.8
Os09t0534600-01	Rice	endoplasmic reticulum, golgi, plasma membrane	14.88	24.13
Solyc04g081630.1.1	Tomato	cytosol	8.73	22.85
TraesCS5D01G258800.1	Wheat	cytosol	0.43	1.2

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
EMBL:AY368906	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam
InterPro:IPR036890	InterPro:IPR037196	HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583
PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF74	UniProt:Q6UJX4	InterPro:Ribosomal_S5_D2-typ_fold
SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	EnsemblPlantsGene:Solyc12g015880.1	EnsemblPlants:Solyc12g015880.1.1
UniParc:UPI0000213E1E	SEG:seg	:	:	:	:

Description

Molecular chaperone Hsp90-1 [Source:UniProtKB/TrEMBL;Acc:Q6UJX4]

Coordinates

chr12:-:5868004..5871038

Molecular Weight (calculated)

80163.4 Da

IEP (calculated)

4.688

GRAVY (calculated)

-0.590

Length

699 amino acids

Sequence
(BLAST)

001: MAEAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFQS LTDKSKLDAQ PELFIHIVPD KTNNTLTIID SGVGMTKADL VNNLGTIARS
101: GTKEFMEAIA AGADVSMIGQ FGVGFYSAYL VAERVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGENLGR GTKMTLFLKE DQLEYLEERR LKDLIKKHSE
201: FISYPISLWV EKTIEKEISD DEDEEEKKDE EGKVEEVDEE KEKEEKKKKK IKEVSNEWSL VNKQKPIWMR KPEEITKEEY AAFYKSLTND WEEHLAVKHF
301: SVEGQLEFKA VLFIPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCEELIP EYLSFVKGIV DSEDLPLNIS REMLQQNKIL KVIRKNLVKK CIELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRSKF AELLRYHSTK SGDEMTSLKD YVTRMKEGQN DIYYITGESK KAVENSPFLE KLKKKGYEVL YMVDAIDEYS
501: IGQLKEFEGK KLVSATKEGL KLEETEDEKK KQEELKEKFE GLCKVIKDVL GDKVEKVVVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL RDSSMAGYMS
601: SKKTMEINPE NAIMDELRKR ADADKNDKSV KDLVLLLFET ALLTSGFSLD EPNTFGNRIH RMLKLGLSID EDGGDAEADM PALEDPEADA EGSKMEEVD

Best Arabidopsis Sequence Match ( AT5G56030.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KTNNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VADKVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGETLGR GTKMVLYLKE DQLEYLEERR LKDLVKKHSE
201: FISYPISLWI EKTIEKEISD DEEEEEKKDE EGKVEEVDEE KEKEEKKKKK IKEVSHEWDL VNKQKPIWMR KPEEINKEEY AAFYKSLSND WEEHLAVKHF
301: SVEGQLEFKA ILFVPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCEDIIP EYLGFVKGIV DSEDLPLNIS RETLQQNKIL KVIRKNLVKK CLELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRTKI AELLRYHSTK SGDELTSLKD YVTRMKEGQN DIFYITGESK KAVENSPFLE KLKKKGIEVL YMVDAIDEYA
501: IGQLKEFEGK KLVSATKEGL KLDETEDEKK KKEELKEKFE GLCKVIKDVL GDKVEKVIVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL RDSSMAGYMS
601: SKKTMEINPE NSIMDELRKR ADADKNDKSV KDLVLLLFET ALLTSGFSLD EPNTFGSRIH RMLKLGLSID DDDAVEADAE MPPLEDDADA EGSKMEEVD

Arabidopsis Description

HSP81-2Heat shock protein 81-2 [Source:UniProtKB/TrEMBL;Acc:F4K6B6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.