CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG20702

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56010.1	KXG20702	AT5G66570.1	16619024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99075	Sorghum	cytosol	99.14	99.14
Zm00001d006008_P001	Maize	plastid	98.28	98.42
Os09t0482600-01	Rice	cytosol	96.71	96.71
Os09t0482400-01	Rice	nucleus	96.71	96.71
Os09t0482100-01	Rice	nucleus	96.71	96.71
EES14299	Sorghum	cytosol	95.71	95.85
GSMUA_Achr9P12680_001	Banana	cytosol	74.68	93.55
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, unclear	83.55	93.44
GSMUA_Achr3P10970_001	Banana	cytosol, plasma membrane	78.68	93.22
GSMUA_Achr11P...	Banana	cytosol	76.82	93.07
GSMUA_Achr3P04010_001	Banana	cytosol	74.68	92.72
Bra035599.1-P	Field mustard	cytosol	74.53	92.54
Solyc12g015880.1.1	Tomato	nucleus	92.27	92.27
Bra035593.1-P	Field mustard	cytosol	88.7	92.26
Bra028924.1-P	Field mustard	cytosol	91.99	91.99
Solyc07g065840.2.1	Tomato	nucleus, plastid	91.56	91.56
Bra028952.1-P	Field mustard	cytosol	91.56	91.56
CDY11961	Canola	cytosol	47.64	91.48
AT5G56010.1	Thale cress	cytosol	91.27	91.27
Bra028948.1-P	Field mustard	cytosol	91.13	91.26
CDY11967	Canola	cytosol	74.68	90.62
CDY22598	Canola	cytosol	61.52	90.53
AT5G56000.1	Thale cress	cytosol	90.41	90.41
AT5G56030.2	Thale cress	cytosol	91.85	88.19
CDY64982	Canola	cytosol	68.38	87.07
CDY36807	Canola	cytosol	71.53	86.96
CDY20742	Canola	cytosol	68.53	86.93
KRH33083	Soybean	cytosol	34.91	86.83
CDY06551	Canola	cytosol	71.1	86.74
CDY11921	Canola	cytosol	66.38	86.41
CDY36775	Canola	cytosol	18.03	85.71
CDY36771	Canola	cytosol	17.88	85.03
CDY36772	Canola	cytosol	43.92	84.57
CDY36776	Canola	cytosol	43.92	84.57
CDY11962	Canola	cytosol	17.45	84.14
EES11741	Sorghum	cytosol	86.12	84.08
KRH05319	Soybean	endoplasmic reticulum	34.76	75.23
PGSC0003DMT400014812	Potato	cytosol	23.18	67.5
KXG20895	Sorghum	endoplasmic reticulum	50.5	43.74
VIT_05s0062g00690.t01	Wine grape	cytosol	14.88	42.98
TraesCS5D01G258900.2	Wheat	plastid	44.64	39.95
EES14330	Sorghum	plastid	44.92	39.85
KXG23570	Sorghum	mitochondrion, plastid	42.78	37.05
Os09t0534600-01	Rice	endoplasmic reticulum, golgi, plasma membrane	15.02	24.36
TraesCS5D01G258800.1	Wheat	cytosol	0.29	0.8

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
EntrezGene:8055854	UniProt:C5X3T9	ncoils:Coil	EnsemblPlants:EER96954	ProteinID:EER96954	ProteinID:EER96954.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196
HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298
PANTHER:PTHR11528	PANTHER:PTHR11528:SF74	InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	EnsemblPlantsGene:SORBI_3002G243500	SUPFAM:SSF110942
SUPFAM:SSF54211	SUPFAM:SSF55874	unigene:Sbi.18200	UniParc:UPI0001A83796	RefSeq:XP_002460433.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:63252127..63255947

Molecular Weight (calculated)

80253.3 Da

IEP (calculated)

4.712

GRAVY (calculated)

-0.609

Length

699 amino acids

Sequence
(BLAST)

001: MATDTETFAF QAEINQLLSL IINTFYSNKE IFLRELISNS SDALDKIRFE SLTDKSKLDA QPELFIHIVP DKASNTLSII DSGIGMTKSD LVNNLGTIAR
101: SGTKEFMEAL AAGADVSMIG QFGVGFYSAY LVAERVVVTT KHNDDEQYVW ESQAGGSFTV TRDTSGEQLG RGTKITLFLK DDQLEYLEER RLKDLVKKHS
201: EFISYPISLW TEKTTEKEIS DDEDEEEKKD AEEGKVEDVD EEKEEKEKKK KKIKEVSHEW SLINKQKPIW MRKPEEITKE EYAAFYKSLT NDWEEHLAVK
301: HFSVEGQLEF KAVLFVPKRA PFDLFDTKKK QNNIKLYVRR VFIMDNCEEL IPEWLSFVKG IVDSEDLPLN ISRETLQQNK ILKVIRKNLV KKCVELFFEI
401: AENKEDYNKF YEAFSKNLKL GIHEDSQNRT KIAELLRYHS TKSGDELTSL KDYVTRMKEG QNDIYYITGE SKKAVENSPF LEKLKKRGYE VLYMVDAIDE
501: YAVGQLKEFE GKKLVSATKE GLKLDETEDE KKRKEELKEK FEGLCKVIKE VLGDKVEKVV VSDRVVDSPC CLVTGEYGWT ANMERIMKAQ ALRDSSMAGY
601: MSSKKTMEIN PENPIMDELR KRAEADKNDK SVKDLVMLLF ETSLLTSGFS LDDPNTFGTR IHRMLKLGLS IDEDESAEAE AEMPPLEDDA GESKMEEVD

Best Arabidopsis Sequence Match ( AT5G56000.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KTNNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VADKVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGEALGR GTKMILYLKE DQMEYIEERR LKDLVKKHSE
201: FISYPISLWI EKTIEKEISD DEEEEEKKDE EGKVEEIDEE KEKEEKKKKK IKEVTHEWDL VNKQKPIWMR KPEEINKEEY AAFYKSLSND WEEHLAVKHF
301: SVEGQLEFKA ILFVPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCEDIIP DYLGFVKGIV DSEDLPLNIS RETLQQNKIL KVIRKNLVKK CLELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRTKI AELLRYHSTK SGDELTSLKD YVTRMKEGQN EIFYITGESK KAVENSPFLE KLKKKGYEVL YMVDAIDEYA
501: IGQLKEFEGK KLVSATKEGL KLEETDDEKK KKEELKEKFE GLCKVIKDVL GDKVEKVIVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL KDSNTGGYMS
601: SKKTMEINPE NSIMDELRKR AEADKNDKSV KDLVLLLFET ALLTSGFSLD EPNTFGSRIH RMLKLGLSIE EDDAVEADAE MPPLEDDADA EGSKMEEVD

Arabidopsis Description

HSP90-4Hsp81.4 [Source:UniProtKB/TrEMBL;Acc:A0A178UQ52]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.