Factsheet for PGSC0003DMT400014812

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014217	Potato	cytosol	53.75	44.95
PGSC0003DMT400074374	Potato	cytosol	45.0	35.29
KRH33083	Soybean	cytosol	36.25	30.96
GSMUA_Achr9P12680_001	Banana	cytosol	62.08	26.7
GSMUA_Achr3P04010_001	Banana	cytosol	62.08	26.47
PGSC0003DMT400024594	Potato	cytosol	68.75	23.44
EER96954	Sorghum	cytosol	67.5	23.18
EER99075	Sorghum	cytosol	67.08	23.03
Os09t0482600-01	Rice	cytosol	67.08	23.03
Os09t0482400-01	Rice	nucleus	67.08	23.03
Os09t0482100-01	Rice	nucleus	67.08	23.03
PGSC0003DMT400057003	Potato	cytosol	66.67	22.89
Zm00001d006008_P001	Maize	plastid	66.25	22.78
PGSC0003DMT400076601	Potato	cytosol	66.25	22.75
PGSC0003DMT400037336	Potato	cytosol	66.25	22.75
GSMUA_Achr3P10970_001	Banana	cytosol, plasma membrane	54.17	22.03
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, unclear	55.83	21.44
GSMUA_Achr11P...	Banana	cytosol	48.75	20.28
KRH05319	Soybean	endoplasmic reticulum	23.75	17.65
PGSC0003DMT400074377	Potato	cytosol	23.75	13.94
PGSC0003DMT400025743	Potato	extracellular	45.83	13.65
TraesCS5D01G258900.2	Wheat	plastid	43.75	13.44
PGSC0003DMT400050556	Potato	cytosol, plastid	42.08	12.67
PGSC0003DMT400015734	Potato	mitochondrion	41.67	12.59
Os09t0534600-01	Rice	endoplasmic reticulum, golgi, plasma membrane	20.0	11.14
VIT_05s0062g00690.t01	Wine grape	cytosol	7.08	7.02
TraesCS5D01G258800.1	Wheat	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.30.230.80	Gene3D:3.30.565.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C_sf	InterPro:Hsp90_fam	InterPro:IPR036890	UniProt:M1A4X5
PFAM:PF00183	EnsemblPlantsGene:PGSC0003DMG400005782	PGSC:PGSC0003DMG400005782	EnsemblPlants:PGSC0003DMT400014812	PANTHER:PTHR11528	PANTHER:PTHR11528:SF74
InterPro:Ribosomal_S5_D2-typ_fold	SUPFAM:SSF54211	SUPFAM:SSF55874	UniParc:UPI000294829A	SEG:seg	:

Description

Heat shock protein 90 [Source:PGSC_GENE;Acc:PGSC0003DMG400005782]

Coordinates

chr8:+:4890873..4891803

Molecular Weight (calculated)

28529.9 Da

IEP (calculated)

9.925

GRAVY (calculated)

-0.506

Length

240 amino acids

Sequence
(BLAST)

001: MVYVIIIDLV KNLGRMAKSG TKEFMEAGAD VSMIGQFGVG FYSSYLVAEK VVVTTCGSLR LVDRSPLHEM SMVELQLEYL EERRIKDLVK KHSEFISYGR
101: RRQLRRRLAM MKTRKEEEGD EDKEKDKKKK IKDEWELINK QKPRKPEESY SFYKSLTNDW EDPLHWKHFS VEGQLEFRAI LFVPKRAPFD LFDTRKKLYV
201: RRVFIMDNCK ELIPEYLGFV KGRVSLILMT FHSTFQVRYS

Best Arabidopsis Sequence Match ( AT5G52640.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIRLVPD KSNKTLSIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALQ AGADVSMIGQ FGVGFYSAYL VAEKVVVTTK HNDDEQYVWE SQAGGSFTVT RDVDGEPLGR GTKITLFLKD DQLEYLEERR LKDLVKKHSE
201: FISYPIYLWT EKTTEKEISD DEDEDEPKKE NEGEVEEVDE EKEKDGKKKK KIKEVSHEWE LINKQKPIWL RKPEEITKEE YAAFYKSLTN DWEDHLAVKH
301: FSVEGQLEFK AILFVPKRAP FDLFDTRKKL NNIKLYVRRV FIMDNCEELI PEYLSFVKGV VDSDDLPLNI SRETLQQNKI LKVIRKNLVK KCIEMFNEIA
401: ENKEDYTKFY EAFSKNLKLG IHEDSQNRGK IADLLRYHST KSGDEMTSFK DYVTRMKEGQ KDIFYITGES KKAVENSPFL ERLKKRGYEV LYMVDAIDEY
501: AVGQLKEYDG KKLVSATKEG LKLEDETEEE KKKREEKKKS FENLCKTIKE ILGDKVEKVV VSDRIVDSPC CLVTGEYGWT ANMERIMKAQ ALRDSSMSGY
601: MSSKKTMEIN PDNGIMEELR KRAEADKNDK SVKDLVMLLY ETALLTSGFS LDEPNTFAAR IHRMLKLGLS IDEDENVEED GDMPELEEDA AEESKMEEVD

Arabidopsis Description

HSP90-1Heat shock protein 90-1 [Source:UniProtKB/Swiss-Prot;Acc:P27323]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.