Factsheet for PGSC0003DMT400014217

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074374	Potato	cytosol	73.87	69.28
Os04t0107900-02	Rice	cytosol	51.57	59.44
PGSC0003DMT400014812	Potato	cytosol	44.95	53.75
VIT_13s0106g00410.t01	Wine grape	cytosol	21.25	50.0
GSMUA_Achr8P19130_001	Banana	cytosol	74.56	36.77
KRH04730	Soybean	cytosol	44.25	35.28
PGSC0003DMT400024594	Potato	cytosol	85.02	34.66
PGSC0003DMT400076601	Potato	cytosol	78.75	32.33
PGSC0003DMT400057003	Potato	cytosol	77.7	31.9
TraesCS2D01G033200.2	Wheat	golgi	78.4	31.6
PGSC0003DMT400037336	Potato	cytosol	76.66	31.47
TraesCS2B01G047400.1	Wheat	cytosol	77.7	31.32
TraesCS2A01G033700.1	Wheat	plastid	77.0	31.26
Zm00001d024903_P001	Maize	plasma membrane	77.7	31.23
EES11741	Sorghum	cytosol	77.7	31.15
VIT_05s0094g00110.t01	Wine grape	nucleus, peroxisome, plastid	17.42	18.66
PGSC0003DMT400025743	Potato	extracellular	49.48	17.62
PGSC0003DMT400050556	Potato	cytosol, plastid	42.86	15.43
PGSC0003DMT400015734	Potato	mitochondrion	41.46	14.99
PGSC0003DMT400074377	Potato	cytosol	14.29	10.02

Protein Annotations

MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:Hsp90_N	InterPro:Hsp90_fam
InterPro:IPR036890	UniProt:M1A3V8	PFAM:PF00183	PFAM:PF02518	EnsemblPlantsGene:PGSC0003DMG400005573	PGSC:PGSC0003DMG400005573
EnsemblPlants:PGSC0003DMT400014217	PRINTS:PR00775	PANTHER:PTHR11528	PANTHER:PTHR11528:SF74	InterPro:Ribosomal_S5_D2-typ_fold	SUPFAM:SSF54211
SUPFAM:SSF55874	UniParc:UPI0002966603	SEG:seg	:	:	:

Description

Heat shock protein 83 [Source:PGSC_GENE;Acc:PGSC0003DMG400005573]

Coordinates

chr6:-:12129194..12131828

Molecular Weight (calculated)

33123.4 Da

IEP (calculated)

5.224

GRAVY (calculated)

-0.689

Length

287 amino acids

Sequence
(BLAST)

001: MQPELFIRLV PDKVNKTLSI IDSGVGMTKA DLVNNLGTIV RSGTKEFMEA LQAGADVSMI GQFGVGFYSE YLVAEKVIVT TKHNDDEQHI WESQAGGSFT
101: VTKDVDEEQL GRGTKITLFL KEDQLEYLKE RRIKDLVKKH SEFISYPIYL WTEKTTEKEI SDDEDDESKK EQEGDIEEVD EDKEKEKGKK KKIKEVSHEW
201: QLINKQKPIC LRKPEEITKE EYAAFYKSLT NDWEEHLAVK HFSVEGQLEF KAILFIPKRA SFDLFGTRKK MNNIKTLCQE GVHHGQL

Best Arabidopsis Sequence Match ( AT5G52640.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIRLVPD KSNKTLSIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALQ AGADVSMIGQ FGVGFYSAYL VAEKVVVTTK HNDDEQYVWE SQAGGSFTVT RDVDGEPLGR GTKITLFLKD DQLEYLEERR LKDLVKKHSE
201: FISYPIYLWT EKTTEKEISD DEDEDEPKKE NEGEVEEVDE EKEKDGKKKK KIKEVSHEWE LINKQKPIWL RKPEEITKEE YAAFYKSLTN DWEDHLAVKH
301: FSVEGQLEFK AILFVPKRAP FDLFDTRKKL NNIKLYVRRV FIMDNCEELI PEYLSFVKGV VDSDDLPLNI SRETLQQNKI LKVIRKNLVK KCIEMFNEIA
401: ENKEDYTKFY EAFSKNLKLG IHEDSQNRGK IADLLRYHST KSGDEMTSFK DYVTRMKEGQ KDIFYITGES KKAVENSPFL ERLKKRGYEV LYMVDAIDEY
501: AVGQLKEYDG KKLVSATKEG LKLEDETEEE KKKREEKKKS FENLCKTIKE ILGDKVEKVV VSDRIVDSPC CLVTGEYGWT ANMERIMKAQ ALRDSSMSGY
601: MSSKKTMEIN PDNGIMEELR KRAEADKNDK SVKDLVMLLY ETALLTSGFS LDEPNTFAAR IHRMLKLGLS IDEDENVEED GDMPELEEDA AEESKMEEVD

Arabidopsis Description

HSP90-1Heat shock protein 90-1 [Source:UniProtKB/Swiss-Prot;Acc:P27323]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.