Factsheet for VIT_05s0094g00110.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus

Predictor Summary:

plastid 2
endoplasmic reticulum 2
mitochondrion 1
peroxisome 2
nucleus 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plastid
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	secretory
PTS1:	peroxisome
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0083g01230.t01	Wine grape	cytosol	16.04	79.63
VIT_08s0007g05760.t01	Wine grape	cytosol	18.66	71.43
VIT_13s0106g00410.t01	Wine grape	cytosol	20.15	44.26
Os04t0107900-02	Rice	cytosol	24.63	26.51
VIT_00s2341g00010.t01	Wine grape	cytosol	4.1	22.45
PGSC0003DMT400014217	Potato	cytosol	18.66	17.42
GSMUA_Achr8P19130_001	Banana	cytosol	27.61	12.71
VIT_16s0050g01150.t01	Wine grape	cytosol	31.72	12.07
VIT_00s0194g00030.t01	Wine grape	cytosol	31.34	12.02
VIT_02s0025g00280.t01	Wine grape	cytosol	30.97	11.81
VIT_19s0015g01090.t01	Wine grape	cytosol	30.97	11.79
TraesCS2D01G033200.2	Wheat	golgi	30.6	11.52
EES11741	Sorghum	cytosol	30.6	11.45
TraesCS2B01G047400.1	Wheat	cytosol	30.22	11.38
TraesCS2A01G033700.1	Wheat	plastid	29.85	11.32
Zm00001d024903_P001	Maize	plasma membrane	29.85	11.2
VIT_18s0001g14500.t01	Wine grape	endoplasmic reticulum	31.72	10.39
KRH04730	Soybean	cytosol	12.69	9.44
VIT_01s0010g00680.t01	Wine grape	plastid	25.75	8.71
VIT_12s0057g00670.t01	Wine grape	cytosol	24.25	7.67
VIT_05s0062g00690.t01	Wine grape	cytosol	6.34	7.02
VIT_00s1569g00010.t01	Wine grape	cytosol	1.49	3.81
VIT_00s0131g00250.t01	Wine grape	cytosol	1.87	2.38

Protein Annotations

Gene3D:1.10.472.10	MapMan:19.1.6.1	Gene3D:3.30.565.10	ProteinID:CCB49357	ProteinID:CCB49357.1	InterPro:Cyclin-like
InterPro:Cyclin-like_sf	InterPro:Cyclin_N	UniProt:F6HB04	EMBL:FN595507	InterPro:HATPase_C_sf	InterPro:Hsp90_N
InterPro:IPR036890	PFAM:PF00134	PIRSF:PIRSF001771	PRINTS:PR00775	PANTHER:PTHR10177	PANTHER:PTHR10177:SF216
SMART:SM00385	SUPFAM:SSF47954	SUPFAM:SSF55874	UniParc:UPI0002109058	ArrayExpress:VIT_05s0094g00110	EnsemblPlantsGene:VIT_05s0094g00110
EnsemblPlants:VIT_05s0094g00110.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr5:+:23484128..23486659

Molecular Weight (calculated)

29762.5 Da

IEP (calculated)

7.178

GRAVY (calculated)

-0.103

Length

268 amino acids

Sequence
(BLAST)

001: MKNCRQLDKK IKQAHHCYSS IISYGFLTVA STKAVEWMLK VNAHYGLSAL TVVLAVNYVD RFLSSSCFQR DRSWMSQLAA ATCLSLAAKV DETDVPLLLD
101: LQVGKAARAS TSSQSLSNGP HLLSQQRSFP GDMGIADDLG FFNYLHEEFV EVSAAGIDEN VIGQFGIGFY LAYLVFEKVI VTIKHNDDKQ YVQESKAGGA
201: FAVSEDVWNE PLGRETEIRF AFQRKSWEYL EKAKLKEWMS GGVNSPVRAF KSVGGQPILI DSLKGSHM

Best Arabidopsis Sequence Match ( AT4G24190.2 )
(BLAST)

001: MRKRTLVSVL FLFSLLFLLP DQGTKLHANA EESSDDVTDP PKVEEKIGGH GGLSTDSDVV HRESESMSKK TLRSNAEKFE FQAEVSRLMD IIINSLYSNK
101: DIFLRELISN ASDALDKIRF LALTDKDVLG EGDTAKLEIQ IKLDKAKKIL SIRDRGIGMT KEDLIKNLGT IAKSGTSAFV EKMQSSGDLN LIGQFGVGFY
201: SAYLVADYIE VISKHNDDSQ YVWESKANGK FAVSEDTWNE PLGRGTEIRL HLRDEAGEYL EESKLKELVK RYSEFINFPI SLWASKEVET EVPVEEDESA
301: DEETETTSTE EEKEEDAEEE DGEKKQKTKK VKETVYEWEL LNDVKAIWLR SPKEVTEEEY TKFYHSLSKD FTDEKPMAWS HFNAEGDVEF KAVLYVPPKA
401: PHDLYESYYN SNKANLKLYV RRVFISDEFD ELLPKYLSFL KGLVDSDTLP LNVSREMLQQ HSSLKTIKKK LIRKALDMIR KLAEEDPDEI HDDEKKDVEK
501: SGENDEKKGQ YTKFWNEFGK SVKLGIIEDA ANRNRLAKLL RFETTKSDGK LTSLDQYIKR MKKSQKDIFY ITGSSKEQLE KSPFLERLIK KGYEVIFFTD
601: PVDEYLMQYL MDYEDKKFQN VSKEGLKVGK DSKDKELKEA FKELTKWWKG NLASENVDDV KISNRLADTP CVVVTSKFGW SANMERIMQS QTLSDANKQA
701: YMRGKRVLEI NPRHPIIKEL KDRIASDPED ESVKETAQLM YQTALIESGF ILTDPKDFAA RIYNSVKSGL NISPDAVADE EIEAAEEPET SEATETKSDD
801: LAGGLNIEAE PVEQQEENTK DEL

Arabidopsis Description

HSP90-7Endoplasmin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9STX5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.