Factsheet for VIT_00s0131g00250.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s1569g00010.t01	Wine grape	cytosol	35.24	70.48
VIT_19s0015g01090.t01	Wine grape	cytosol	49.05	14.63
VIT_00s0194g00030.t01	Wine grape	cytosol	46.19	13.88
VIT_02s0025g00280.t01	Wine grape	cytosol	43.33	12.94
VIT_16s0050g01150.t01	Wine grape	cytosol	41.43	12.36
VIT_05s0062g00690.t01	Wine grape	cytosol	13.81	11.98
VIT_18s0001g14500.t01	Wine grape	endoplasmic reticulum	23.81	6.11
VIT_01s0010g00680.t01	Wine grape	plastid	22.38	5.93
VIT_12s0057g00670.t01	Wine grape	cytosol	19.52	4.84
VIT_13s0106g00410.t01	Wine grape	cytosol	1.9	3.28
VIT_00s2341g00010.t01	Wine grape	cytosol	0.48	2.04
VIT_05s0094g00110.t01	Wine grape	nucleus, peroxisome, plastid	2.38	1.87
VIT_14s0083g01230.t01	Wine grape	cytosol	0.48	1.85
VIT_08s0007g05760.t01	Wine grape	cytosol	0.48	1.43

Protein Annotations

Gene3D:1.20.120.790	MapMan:35.1	ProteinID:CCB49442	ProteinID:CCB49442.1	UniProt:F6HB48	EMBL:FN595508
GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006139	GO:GO:0006259	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015074	GO:GO:0051082	InterPro:HSP90_C	InterPro:Hsp90_fam	InterPro:IPR037196
PFAM:PF00183	PANTHER:PTHR11528	PANTHER:PTHR11528:SF50	SUPFAM:SSF110942	UniParc:UPI00015CD3E7	ArrayExpress:VIT_00s0131g00250
EnsemblPlantsGene:VIT_00s0131g00250	EnsemblPlants:VIT_00s0131g00250.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrUn:-:2703100..2703785

Molecular Weight (calculated)

23834.7 Da

IEP (calculated)

6.507

GRAVY (calculated)

-0.232

Length

210 amino acids

Sequence
(BLAST)

001: MTGEYGWTAN MERIMKAQAL KDSSTAGCMS SKRTMEINPE NPIMEELRKR TDMDKNDKSV KNVVLSLFET SLLTSGFSLD EPNSFGNRIH RMLKLSLNID
101: EEAGDVDVDM LPLEEADAEA DWQLKAEISH LLLVFLQRHH HSLSILGPLM RASNRMASFR MATLLSPLPK PTCSTYFHAC TQWRVSLMHI YLFICTTSSF
201: SISSFNPHPF

Best Arabidopsis Sequence Match ( AT5G52640.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIRLVPD KSNKTLSIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALQ AGADVSMIGQ FGVGFYSAYL VAEKVVVTTK HNDDEQYVWE SQAGGSFTVT RDVDGEPLGR GTKITLFLKD DQLEYLEERR LKDLVKKHSE
201: FISYPIYLWT EKTTEKEISD DEDEDEPKKE NEGEVEEVDE EKEKDGKKKK KIKEVSHEWE LINKQKPIWL RKPEEITKEE YAAFYKSLTN DWEDHLAVKH
301: FSVEGQLEFK AILFVPKRAP FDLFDTRKKL NNIKLYVRRV FIMDNCEELI PEYLSFVKGV VDSDDLPLNI SRETLQQNKI LKVIRKNLVK KCIEMFNEIA
401: ENKEDYTKFY EAFSKNLKLG IHEDSQNRGK IADLLRYHST KSGDEMTSFK DYVTRMKEGQ KDIFYITGES KKAVENSPFL ERLKKRGYEV LYMVDAIDEY
501: AVGQLKEYDG KKLVSATKEG LKLEDETEEE KKKREEKKKS FENLCKTIKE ILGDKVEKVV VSDRIVDSPC CLVTGEYGWT ANMERIMKAQ ALRDSSMSGY
601: MSSKKTMEIN PDNGIMEELR KRAEADKNDK SVKDLVMLLY ETALLTSGFS LDEPNTFAAR IHRMLKLGLS IDEDENVEED GDMPELEEDA AEESKMEEVD

Arabidopsis Description

HSP90-1Heat shock protein 90-1 [Source:UniProtKB/Swiss-Prot;Acc:P27323]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.