Factsheet for VIT_00s1569g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0131g00250.t01	Wine grape	cytosol	70.48	35.24
VIT_00s0194g00030.t01	Wine grape	cytosol	98.1	14.74
KRH14196	Soybean	endoplasmic reticulum, nucleus	94.29	14.14
KRH73936	Soybean	endoplasmic reticulum, nucleus	93.33	13.96
VIT_19s0015g01090.t01	Wine grape	cytosol	87.62	13.07
VIT_02s0025g00280.t01	Wine grape	cytosol	80.95	12.09
KRH41482	Soybean	mitochondrion	72.38	11.6
VIT_16s0050g01150.t01	Wine grape	cytosol	76.19	11.36
VIT_05s0062g00690.t01	Wine grape	cytosol	13.33	5.79
VIT_18s0001g14500.t01	Wine grape	endoplasmic reticulum	33.33	4.28
VIT_01s0010g00680.t01	Wine grape	plastid	29.52	3.91
VIT_12s0057g00670.t01	Wine grape	cytosol	26.67	3.31
VIT_13s0106g00410.t01	Wine grape	cytosol	3.81	3.28
VIT_14s0083g01230.t01	Wine grape	cytosol	0.95	1.85
VIT_05s0094g00110.t01	Wine grape	nucleus, peroxisome, plastid	3.81	1.49
VIT_08s0007g05760.t01	Wine grape	cytosol	0.95	1.43
VIT_00s2341g00010.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.120.790	EntrezGene:104878626	MapMan:35.1	ProteinID:CCB45361	ProteinID:CCB45361.1	UniProt:F6GZH5
EMBL:FN595112	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP90_C
InterPro:Hsp90_fam	InterPro:IPR037196	PFAM:PF00183	PANTHER:PTHR11528	PANTHER:PTHR11528:SF50	SUPFAM:SSF110942
UniParc:UPI0002108FA2	ArrayExpress:VIT_00s1569g00010	EnsemblPlantsGene:VIT_00s1569g00010	EnsemblPlants:VIT_00s1569g00010.t01	RefSeq:XP_010647524.1	SEG:seg

Description

No Description!

Coordinates

chrUn:+:39644005..39644578

Molecular Weight (calculated)

11677.8 Da

IEP (calculated)

4.065

GRAVY (calculated)

-0.637

Length

105 amino acids

Sequence
(BLAST)

001: MAGYMSSKKT MEINPENPIM EELRKRADAD KNDKSVKDLV LLLFETALLT SGFSLDEPNT FGNRIHRMMK LGLSIDEDGP EADAEMPPLE EADADAEGSK
101: MEEVD

Best Arabidopsis Sequence Match ( AT5G52640.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIRLVPD KSNKTLSIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALQ AGADVSMIGQ FGVGFYSAYL VAEKVVVTTK HNDDEQYVWE SQAGGSFTVT RDVDGEPLGR GTKITLFLKD DQLEYLEERR LKDLVKKHSE
201: FISYPIYLWT EKTTEKEISD DEDEDEPKKE NEGEVEEVDE EKEKDGKKKK KIKEVSHEWE LINKQKPIWL RKPEEITKEE YAAFYKSLTN DWEDHLAVKH
301: FSVEGQLEFK AILFVPKRAP FDLFDTRKKL NNIKLYVRRV FIMDNCEELI PEYLSFVKGV VDSDDLPLNI SRETLQQNKI LKVIRKNLVK KCIEMFNEIA
401: ENKEDYTKFY EAFSKNLKLG IHEDSQNRGK IADLLRYHST KSGDEMTSFK DYVTRMKEGQ KDIFYITGES KKAVENSPFL ERLKKRGYEV LYMVDAIDEY
501: AVGQLKEYDG KKLVSATKEG LKLEDETEEE KKKREEKKKS FENLCKTIKE ILGDKVEKVV VSDRIVDSPC CLVTGEYGWT ANMERIMKAQ ALRDSSMSGY
601: MSSKKTMEIN PDNGIMEELR KRAEADKNDK SVKDLVMLLY ETALLTSGFS LDEPNTFAAR IHRMLKLGLS IDEDENVEED GDMPELEEDA AEESKMEEVD

Arabidopsis Description

HSP90-1Heat shock protein 90-1 [Source:UniProtKB/Swiss-Prot;Acc:P27323]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.