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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, nucleus

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, nucleus
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
 nucleus: 21132161
endoplasmic reticulum: 27224218
nucleus: 27291164
mitochondrion: 27780359
endoplasmic reticulum: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 27780359 doi
G Mustafa, S Komatsu
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27291164 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH14196 Soybean endoplasmic reticulum, nucleus 99.15 99.43
KRH46427 Soybean nucleus 94.59 94.99
KRG98439 Soybean nucleus 94.3 94.3
VIT_00s1569g00010.t01 Wine grape cytosol 13.96 93.33
KRH33083 Soybean cytosol 36.32 90.75
KRH38373 Soybean nucleus 88.03 88.41
KRH08858 Soybean nucleus 87.46 87.84
KRH04730 Soybean cytosol 44.3 86.39
KRG89657 Soybean cytosol 13.39 84.68
KRH41482 Soybean mitochondrion 77.49 83.05
KRH05319 Soybean endoplasmic reticulum 36.32 78.95
KRG94627 Soybean cytosol 30.48 68.81
KRH50203 Soybean cytosol 24.07 55.59
KRH05964 Soybean endoplasmic reticulum 50.71 43.73
KRH17444 Soybean nucleus 51.14 42.38
KRH71021 Soybean nucleus 45.87 40.55
KRH75182 Soybean plastid 45.58 40.35
KRH14117 Soybean mitochondrion 45.16 39.77
KRH74006 Soybean mitochondrion 44.59 39.57
Protein Annotations
Gene3D:1.20.120.790MapMan:19.1.6.1Gene3D:3.30.230.80Gene3D:3.30.565.10Gene3D:3.30.70.2140Gene3D:3.40.50.11260
EMBL:ACUP02001291ncoils:CoilEnsemblPlantsGene:GLYMA_02G302500GO:GO:0000166GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0006457GO:GO:0006950GO:GO:0008150GO:GO:0009987
GO:GO:0051082InterPro:HATPase_CInterPro:HATPase_C_sfInterPro:HSP90_CInterPro:Heat_shock_protein_90_CSInterPro:Hsp90_N
InterPro:Hsp90_famUniProt:I1JJL6InterPro:IPR036890InterPro:IPR037196EnsemblPlants:KRH73936ProteinID:KRH73936
ProteinID:KRH73936.1HAMAP:MF_00505PFAM:PF00183PFAM:PF02518PIRSF:PIRSF002583PRINTS:PR00775
ScanProsite:PS00298PANTHER:PTHR11528PANTHER:PTHR11528:SF74InterPro:Ribosomal_S5_D2-typ_foldSMART:SM00387SUPFAM:SSF110942
SUPFAM:SSF54211SUPFAM:SSF55874UniParc:UPI00023BCED1SEG:seg::
Description
hypothetical protein
Coordinates
chr2:-:47792409..47795587
Molecular Weight (calculated)
80333.5 Da
IEP (calculated)
4.686
GRAVY (calculated)
-0.584
Length
702 amino acids
Sequence
(BLAST)
001: MASETETFAF QAEINQLLSL IINTFYSNKE IFLRELISNA SDALDKIRFE SLTDKSKLDA QPELFIHIIP DKTNNTLSII DSGIGMTKAD LVNNLGTIAR
101: SGTKEFMEAL AAGADVSMIG QFGVGFYSAY LVADKVIVTT KHNDDEQYVW ESHAGGSFTV TRDTSGENLG RGTKITLFLK EDQLEYLEER RLKDLIKKHS
201: EFISYPISLW IEKTTEKEIS DDEDEEEKKD EEGKVEDVDE DKEKEEKKKK TIKEVSHEWS LVNKQKPIWM RKPEEITKEE YAAFYKSLTN DWEEHLAVKH
301: FSVEGQLEFK AVLFIPKRAP FDLFDTKKKP NNIKLYVRRV FIMDNCEELM PEYLSFVKGI VDSEDLPLNI SREMLQQNKI LKVIRKNLVK KCIEMFFEIA
401: ENKEDYNKFY EAFSKNLKLG IHEDSQNKTK LAELLRYHST KSGDEMTSLK DYVTRMKEGQ NDIYYITGES KKAVENSPFL EKLKKKGFEV LYMVDAIDEY
501: AVGQLKEFEG KKLVSATKEG LKLDESEDEK KKKEELKEKF EGLCHVIKDV LGDKVEKVVV SDRVVDSPCC LVTGEYGWTA NMERIMKAQA LRDSSMAGYM
601: SSKKTMEINP ENPIMDELRK RADADKNDKS VKDLVLLLFE TALLTSGFSL DDPNTFGNRI HRMLKLGLSI DEDAGEADAD MPPLEDADAD ADAEGSKMEE
701: VD
Best Arabidopsis Sequence Match ( AT5G56030.1 )
(BLAST)
001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KTNNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VADKVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGETLGR GTKMVLYLKE DQLEYLEERR LKDLVKKHSE
201: FISYPISLWI EKTIEKEISD DEEEEEKKDE EGKVEEVDEE KEKEEKKKKK IKEVSHEWDL VNKQKPIWMR KPEEINKEEY AAFYKSLSND WEEHLAVKHF
301: SVEGQLEFKA ILFVPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCEDIIP EYLGFVKGIV DSEDLPLNIS RETLQQNKIL KVIRKNLVKK CLELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRTKI AELLRYHSTK SGDELTSLKD YVTRMKEGQN DIFYITGESK KAVENSPFLE KLKKKGIEVL YMVDAIDEYA
501: IGQLKEFEGK KLVSATKEGL KLDETEDEKK KKEELKEKFE GLCKVIKDVL GDKVEKVIVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL RDSSMAGYMS
601: SKKTMEINPE NSIMDELRKR ADADKNDKSV KDLVLLLFET ALLTSGFSLD EPNTFGSRIH RMLKLGLSID DDDAVEADAE MPPLEDDADA EGSKMEEVD
Arabidopsis Description
HSP81-2Heat shock protein 81-2 [Source:UniProtKB/TrEMBL;Acc:F4K6B6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.