CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0083g01230.t01	Wine grape	cytosol	25.23	51.85
VIT_08s0007g05760.t01	Wine grape	cytosol	28.83	45.71
TraesCS1A01G154800.1	Wheat	endoplasmic reticulum	38.74	28.48
TraesCS3A01G155700.1	Wheat	endoplasmic reticulum, extracellular	37.84	27.81
TraesCS1A01G131700.1	Wheat	endoplasmic reticulum	37.84	27.81
TraesCS3A01G119400.1	Wheat	extracellular	36.94	27.15
KRH46427	Soybean	nucleus	85.59	13.59
KRH14196	Soybean	endoplasmic reticulum, nucleus	84.68	13.43
KRH73936	Soybean	endoplasmic reticulum, nucleus	84.68	13.39
KRG98439	Soybean	nucleus	84.68	13.39
KRH38373	Soybean	nucleus	80.18	12.73
KRH08858	Soybean	nucleus	79.28	12.59
KRH41482	Soybean	mitochondrion	48.65	8.24
KRH04730	Soybean	cytosol	24.32	7.5
KRH05964	Soybean	endoplasmic reticulum	54.95	7.49
KRH71021	Soybean	nucleus	52.25	7.3
KRH17444	Soybean	nucleus	54.95	7.2
KRH75182	Soybean	plastid	51.35	7.19
KRH74006	Soybean	mitochondrion	47.75	6.7
KRH14117	Soybean	mitochondrion	46.85	6.52
KRH50203	Soybean	cytosol	10.81	3.95
KRH05319	Soybean	endoplasmic reticulum	1.8	0.62
KRG94627	Soybean	cytosol	0.0	0.0
KRH33083	Soybean	cytosol	0.0	0.0

Protein Annotations

MapMan:19.1.6.1	Gene3D:3.30.565.10	EMBL:ACUP02012241	EnsemblPlantsGene:GLYMA_20G037900	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:Hsp90_N	InterPro:Hsp90_fam
InterPro:IPR036890	UniProt:K7N193	EnsemblPlants:KRG89657	ProteinID:KRG89657	ProteinID:KRG89657.1	PFAM:PF13589
PRINTS:PR00775	PANTHER:PTHR11528	PANTHER:PTHR11528:SF74	SUPFAM:SSF55874	UniParc:UPI0002950719	:

Description

hypothetical protein

Coordinates

chr20:-:5802667..5810786

Molecular Weight (calculated)

12321.9 Da

IEP (calculated)

4.792

GRAVY (calculated)

0.105

Length

111 amino acids

Sequence
(BLAST)

001: MTLDKIRFKS LTDKSKLNAQ LELFIHIIPE KTNNTLTIID SGIGMTKADL MNNLGTIVGS GTKEFMEALV VGVDVSMIAQ FGVGFYSAYL VAEKFIVTAK
101: HNDDEQYVWE S

Best Arabidopsis Sequence Match ( AT5G52640.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIRLVPD KSNKTLSIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALQ AGADVSMIGQ FGVGFYSAYL VAEKVVVTTK HNDDEQYVWE SQAGGSFTVT RDVDGEPLGR GTKITLFLKD DQLEYLEERR LKDLVKKHSE
201: FISYPIYLWT EKTTEKEISD DEDEDEPKKE NEGEVEEVDE EKEKDGKKKK KIKEVSHEWE LINKQKPIWL RKPEEITKEE YAAFYKSLTN DWEDHLAVKH
301: FSVEGQLEFK AILFVPKRAP FDLFDTRKKL NNIKLYVRRV FIMDNCEELI PEYLSFVKGV VDSDDLPLNI SRETLQQNKI LKVIRKNLVK KCIEMFNEIA
401: ENKEDYTKFY EAFSKNLKLG IHEDSQNRGK IADLLRYHST KSGDEMTSFK DYVTRMKEGQ KDIFYITGES KKAVENSPFL ERLKKRGYEV LYMVDAIDEY
501: AVGQLKEYDG KKLVSATKEG LKLEDETEEE KKKREEKKKS FENLCKTIKE ILGDKVEKVV VSDRIVDSPC CLVTGEYGWT ANMERIMKAQ ALRDSSMSGY
601: MSSKKTMEIN PDNGIMEELR KRAEADKNDK SVKDLVMLLY ETALLTSGFS LDEPNTFAAR IHRMLKLGLS IDEDENVEED GDMPELEEDA AEESKMEEVD

Arabidopsis Description

HSP90-1Heat shock protein 90-1 [Source:UniProtKB/Swiss-Prot;Acc:P27323]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.