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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 9
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
EpiLoc:endoplasmic reticulum
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum, mitochondrion
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:endoplasmic reticulum
 nucleus: 21132161
endoplasmic reticulum: 27224218
nucleus: 27291164
mitochondrion: 27780359
endoplasmic reticulum: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 27780359 doi
G Mustafa, S Komatsu
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27291164 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH17444 Soybean nucleus 98.28 94.45
VIT_18s0001g14500.t01 Wine grape endoplasmic reticulum 86.61 86.19
GSMUA_Achr7P17770_001 Banana endoplasmic reticulum 84.03 84.03
PGSC0003DMT400025743 Potato extracellular 82.56 83.37
GSMUA_Achr1P07620_001 Banana endoplasmic reticulum 83.05 82.94
Os06t0716700-02 Rice plasma membrane 80.71 80.91
CDY34264 Canola endoplasmic reticulum 81.45 80.66
CDY03477 Canola endoplasmic reticulum 81.45 80.66
KXG20895 Sorghum endoplasmic reticulum 79.73 80.42
Bra013774.1-P Field mustard endoplasmic reticulum 81.2 80.41
Zm00001d036401_P001 Maize plasma membrane 79.12 80.1
AT4G24190.1 Thale cress endoplasmic reticulum 80.84 79.95
CDX92620 Canola endoplasmic reticulum 77.03 79.17
Zm00001d014792_P003 Maize plasma membrane 78.26 78.84
CDY08910 Canola endoplasmic reticulum 75.68 78.67
CDY24830 Canola endoplasmic reticulum 78.87 78.39
Bra010500.1-P Field mustard endoplasmic reticulum 74.94 77.61
TraesCS7D01G517800.1 Wheat golgi, plastid 78.13 76.08
CDY10992 Canola endoplasmic reticulum 80.47 75.2
Zm00001d009931_P001 Maize cytosol 16.58 75.0
HORVU7Hr1G117000.1 Barley plastid 78.01 70.87
KRG89657 Soybean cytosol 7.49 54.95
KRH38373 Soybean nucleus 44.47 51.79
KRH08858 Soybean nucleus 43.98 51.22
KRG98439 Soybean nucleus 43.98 51.0
KRH73936 Soybean endoplasmic reticulum, nucleus 43.73 50.71
KRH46427 Soybean nucleus 43.49 50.64
KRH14196 Soybean endoplasmic reticulum, nucleus 43.49 50.57
KRH04730 Soybean cytosol 20.76 46.94
KRH33083 Soybean cytosol 16.09 46.62
KRH05319 Soybean endoplasmic reticulum 17.57 44.27
KRH14117 Soybean mitochondrion 42.51 43.41
KRH41482 Soybean mitochondrion 34.77 43.21
KRH71021 Soybean nucleus 41.65 42.7
KRH74006 Soybean mitochondrion 41.4 42.6
KRH75182 Soybean plastid 41.28 42.37
KRG94627 Soybean cytosol 15.48 40.51
KRH50203 Soybean cytosol 13.39 35.86
Solyc04g081630.1.1 Tomato cytosol 10.07 30.71
Protein Annotations
Gene3D:1.20.120.790EntrezGene:100819942MapMan:19.1.6.1Gene3D:3.30.230.80Gene3D:3.30.565.10Gene3D:3.30.70.2140
Gene3D:3.40.50.11260EMBL:ACUP02010784EnsemblPlantsGene:GLYMA_17G258700GO:GO:0000166GO:GO:0000287GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006457GO:GO:0006950GO:GO:0008150GO:GO:0008152
GO:GO:0008253GO:GO:0009987GO:GO:0016311GO:GO:0016787GO:GO:0051082InterPro:HATPase_C
InterPro:HATPase_C_sfInterPro:HSP90_CInterPro:Heat_shock_protein_90_CSInterPro:Hsp90_NInterPro:Hsp90_famUniProt:I1MY38
InterPro:IPR036890InterPro:IPR037196EnsemblPlants:KRH05964ProteinID:KRH05964ProteinID:KRH05964.1HAMAP:MF_00505
PFAM:PF00183PFAM:PF02518PIRSF:PIRSF002583PRINTS:PR00775ScanProsite:PS00298PANTHER:PTHR11528
PANTHER:PTHR11528:SF73InterPro:Ribosomal_S5_D2-typ_foldSMART:SM00387SUPFAM:SSF110942SUPFAM:SSF54211SUPFAM:SSF55874
SignalP:SignalP-noTMUniParc:UPI000233EAD2SEG:seg:::
Description
hypothetical protein
Coordinates
chr17:-:41280210..41284624
Molecular Weight (calculated)
93298.3 Da
IEP (calculated)
4.593
GRAVY (calculated)
-0.717
Length
814 amino acids
Sequence
(BLAST)
001: MRKWTVASAL LLLSLLFLFA DQGRKFQANA EGDSDELVDP PKVEDKIGAV PHGLSTDSDV VKRESESISK RSLRSNAEKF EFQAEVSRLM DIIINSLYSN
101: KDIFLRELIS NASDALDKIR FLSLTDKDVL GEGDNTKLDI QIKLDKEKKI LSIRDRGIGM TKEDLIKNLG TIAKSGTSAF VEKMQTSGDL NLIGQFGVGF
201: YSVYLVADYV EVISKNNDDK QYVWESKADG AFAISEDTWN EPLGRGTEIR LHLKEEAGEY LQESKLKELV KRYSEFINFP IYIWASKEVD VEVPADEDDS
301: SDEEDSSESS SKEESEDEDA DKSEDEEKKP KTKTVKETTY EWELLNDVKA IWLRNPKEVT EEEYTKFYHS LAKDFSDEKP LAWSHFTAEG DVEFKAVLFV
401: PPKAPQDLYE SYYNANKSNL KLYVRRVFIS DEFNELLPKY LNFLLGLVDS DTLPLNVSRE MLQQHSSLKT IKKKLIRKAL DMIRRIADED PDESTDKEKK
501: EDTSSDNNEK KGQYSKFWNE FGKSIKLGII EDATNRNRLA KLLRFESTKS EGKLTSLDQY ISRMKAGQKD IFYITGTSKE QLENSPFLER LKKKNFEVIF
601: FTDPVDEYLM QYLMDYEDKK FQNVSKEGLK LGKDSKDKEL KESFKDLTKW WKTALSKDNV DDVKISNRLD NTPCVVVTSK FGWSANMERI MQSQTLSDAS
701: KQAYMRGKRV LEVNPRHPII KELRERVVKN PEDEGVKHTA QLMYQTALFE SGFLLDDPKD FASRIYDSVK TSLDISPEAT VEEEDDTEVE AESDSKPEAD
801: AVHDGDVDDA KDEL
Best Arabidopsis Sequence Match ( AT4G24190.1 )
(BLAST)
001: MRKRTLVSVL FLFSLLFLLP DQGRKLHANA EESSDDVTDP PKVEEKIGGH GGLSTDSDVV HRESESMSKK TLRSNAEKFE FQAEVSRLMD IIINSLYSNK
101: DIFLRELISN ASDALDKIRF LALTDKDVLG EGDTAKLEIQ IKLDKAKKIL SIRDRGIGMT KEDLIKNLGT IAKSGTSAFV EKMQSSGDLN LIGQFGVGFY
201: SAYLVADYIE VISKHNDDSQ YVWESKANGK FAVSEDTWNE PLGRGTEIRL HLRDEAGEYL EESKLKELVK RYSEFINFPI SLWASKEVET EVPVEEDESA
301: DEETETTSTE EEKEEDAEEE DGEKKQKTKK VKETVYEWEL LNDVKAIWLR SPKEVTEEEY TKFYHSLSKD FTDEKPMAWS HFNAEGDVEF KAVLYVPPKA
401: PHDLYESYYN SNKANLKLYV RRVFISDEFD ELLPKYLSFL KGLVDSDTLP LNVSREMLQQ HSSLKTIKKK LIRKALDMIR KLAEEDPDEI HDDEKKDVEK
501: SGENDEKKGQ YTKFWNEFGK SVKLGIIEDA ANRNRLAKLL RFETTKSDGK LTSLDQYIKR MKKSQKDIFY ITGSSKEQLE KSPFLERLIK KGYEVIFFTD
601: PVDEYLMQYL MDYEDKKFQN VSKEGLKVGK DSKDKELKEA FKELTKWWKG NLASENVDDV KISNRLADTP CVVVTSKFGW SANMERIMQS QTLSDANKQA
701: YMRGKRVLEI NPRHPIIKEL KDRIASDPED ESVKETAQLM YQTALIESGF ILTDPKDFAA RIYNSVKSGL NISPDAVADE EIEAAEEPET SEATETKSDD
801: LAGGLNIEAE PVEQQEENTK DEL
Arabidopsis Description
HSP90-7Endoplasmin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9STX5]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.