Factsheet for TraesCS7D01G517800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid

Predictor Summary:

endoplasmic reticulum 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid
Any Predictor:	endoplasmic reticulum, mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

plastid: 16481623
plastid: 16595579
golgi: 23128297
golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 16595579 doi

Y Balmer, WH Vensel, FM DuPont, BB Buchanan, WJ Hurkman

Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

msms PMID: 16481623 doi

Y Balmer, WH Vensel, N Cai, W Manieri, P Schürmann, WJ Hurkman, BB Buchanan

Department of Plant and Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0716700-02	Rice	plasma membrane	88.88	91.5
HORVU7Hr1G117000.1	Barley	plastid	97.73	91.18
Zm00001d036401_P001	Maize	plasma membrane	87.2	90.67
KXG20895	Sorghum	endoplasmic reticulum	87.44	90.58
Zm00001d014792_P003	Maize	plasma membrane	86.96	89.98
GSMUA_Achr7P17770_001	Banana	endoplasmic reticulum	82.89	85.14
GSMUA_Achr1P07620_001	Banana	endoplasmic reticulum	81.58	83.68
Zm00001d009931_P001	Maize	cytosol	17.22	80.0
PGSC0003DMT400025743	Potato	extracellular	76.91	79.78
Solyc04g081570.2.1	Tomato	plastid	77.27	79.56
VIT_18s0001g14500.t01	Wine grape	endoplasmic reticulum	77.39	79.1
KRH05964	Soybean	endoplasmic reticulum	76.08	78.13
CDY34264	Canola	endoplasmic reticulum	75.96	77.25
CDY03477	Canola	endoplasmic reticulum	75.84	77.13
Bra013774.1-P	Field mustard	endoplasmic reticulum	75.72	77.01
AT4G24190.1	Thale cress	endoplasmic reticulum	75.12	76.31
CDX92620	Canola	endoplasmic reticulum	71.65	75.63
CDY24830	Canola	endoplasmic reticulum	74.04	75.58
CDY08910	Canola	endoplasmic reticulum	70.69	75.48
KRH17444	Soybean	nucleus	76.32	75.32
Bra010500.1-P	Field mustard	endoplasmic reticulum	70.1	74.55
CDY10992	Canola	endoplasmic reticulum	74.64	71.64
TraesCS7D01G241100.1	Wheat	golgi	41.87	50.0
TraesCS5D01G268000.1	Wheat	cytosol	41.51	49.57
TraesCS2D01G033200.2	Wheat	golgi	41.51	48.74
TraesCS5D01G258900.2	Wheat	plastid	40.31	43.15
TraesCS5D01G113700.1	Wheat	mitochondrion, plastid	37.92	33.12
Solyc04g081630.1.1	Tomato	cytosol	9.69	30.34
TraesCS6D01G046900.1	Wheat	cytosol	6.22	26.94
TraesCS5D01G258800.1	Wheat	cytosol	0.24	0.8

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C
InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890
InterPro:IPR037196	HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775
ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF73	InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	SUPFAM:SSF110942
SUPFAM:SSF54211	SUPFAM:SSF55874	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G517800	EnsemblPlants:TraesCS7D01G517800.1	TIGR:cd00075
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:616505544..616510524

Molecular Weight (calculated)

96081.4 Da

IEP (calculated)

4.851

GRAVY (calculated)

-0.731

Length

836 amino acids

Sequence
(BLAST)

001: MGRASRRPRV RRTRRAHPVL VGRVKRRPST MRKWALSCAL LLVLLLTTLP DPAKKLQVNA EESSDEVGDF PKVEEKLGAV PHGLSTDSEV VQRESESISR
101: KTLRNSAEKF EFQAEVSRLM DIIINSLYSN KDIFLRELIS NASDALDKIR FLTLTDKEAL GEGDTAKLEI QIKLDKENKI LSIRDRGVGM TKEDLIKNLG
201: TIAKSGTSAF VEKMQTGGDL NLIGQFGVGF YSVYLVADYV EVVSKHNDDK QYVWESKADG SFAISEDTWN EPLGRGTEIK LHLRDEAKEY LEEGKLKDLV
301: KKYSEFINFP IYLWATKEVD VEVPADEESS EEEESTTETT EEEETEDDEE KKPKTKTVKE TTTEWELLND MKAVWLRNPK EVTEEEYAKF YHSLAKDFGD
401: DKPMTWSHFS AEGDVEFKAL LFVPPKAPHD LYESYYNANK SNLKLYVRRV FISDEFDDLL PKYLSFLMGI VDSDTLPLNV SREMLQQHSS LKTIKKKLIR
501: KALDMIRKLA EEDPDEYSNK EKTDDEKSAM EEKKGQYAKF WNEFGKSVKL GIIEDATNRN RLAKLLRFES SKSDGKLVSL DEYISRMKSG QKDIFYLTGS
601: SKEQLEKSPF LEQLTKKNYE VIYFTDPVDE YLMQYLMDYE DKKFQNVSKE GLKLGKDSKL KDLKESFKEL TDWWKKALDT EGIDSVKISN RLHNTPCVVV
701: TSKYGWSSNM EKIMQAQTLS DASKQAYMRG KRVLEINPRH PIIKELRDKV AQDSDSEGLK QTARLVYQTA LMESGFNLPD PKDFASSIYR SVQKSLDLSP
801: DAAVEEEEEV EEPEVEEKES AKAEEPEHEQ YDKDEL

Best Arabidopsis Sequence Match ( AT4G24190.1 )
(BLAST)

001: MRKRTLVSVL FLFSLLFLLP DQGRKLHANA EESSDDVTDP PKVEEKIGGH GGLSTDSDVV HRESESMSKK TLRSNAEKFE FQAEVSRLMD IIINSLYSNK
101: DIFLRELISN ASDALDKIRF LALTDKDVLG EGDTAKLEIQ IKLDKAKKIL SIRDRGIGMT KEDLIKNLGT IAKSGTSAFV EKMQSSGDLN LIGQFGVGFY
201: SAYLVADYIE VISKHNDDSQ YVWESKANGK FAVSEDTWNE PLGRGTEIRL HLRDEAGEYL EESKLKELVK RYSEFINFPI SLWASKEVET EVPVEEDESA
301: DEETETTSTE EEKEEDAEEE DGEKKQKTKK VKETVYEWEL LNDVKAIWLR SPKEVTEEEY TKFYHSLSKD FTDEKPMAWS HFNAEGDVEF KAVLYVPPKA
401: PHDLYESYYN SNKANLKLYV RRVFISDEFD ELLPKYLSFL KGLVDSDTLP LNVSREMLQQ HSSLKTIKKK LIRKALDMIR KLAEEDPDEI HDDEKKDVEK
501: SGENDEKKGQ YTKFWNEFGK SVKLGIIEDA ANRNRLAKLL RFETTKSDGK LTSLDQYIKR MKKSQKDIFY ITGSSKEQLE KSPFLERLIK KGYEVIFFTD
601: PVDEYLMQYL MDYEDKKFQN VSKEGLKVGK DSKDKELKEA FKELTKWWKG NLASENVDDV KISNRLADTP CVVVTSKFGW SANMERIMQS QTLSDANKQA
701: YMRGKRVLEI NPRHPIIKEL KDRIASDPED ESVKETAQLM YQTALIESGF ILTDPKDFAA RIYNSVKSGL NISPDAVADE EIEAAEEPET SEATETKSDD
801: LAGGLNIEAE PVEQQEENTK DEL

Arabidopsis Description

HSP90-7Endoplasmin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9STX5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.