Factsheet for TraesCS6D01G046900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s2341g00010.t01	Wine grape	cytosol	16.58	65.31
CDY50296	Canola	cytosol	18.65	58.06
HORVU7Hr1G049340.2	Barley	cytosol	23.83	52.27
CDY06544	Canola	cytosol	23.32	39.13
TraesCS3B01G595900.1	Wheat	plastid	33.68	23.64
TraesCS2D01G033200.2	Wheat	golgi	32.64	8.85
TraesCS7D01G241100.1	Wheat	golgi	31.09	8.57
TraesCS5D01G268000.1	Wheat	cytosol	30.57	8.43
TraesCS5D01G258900.2	Wheat	plastid	25.91	6.4
TraesCS7D01G517800.1	Wheat	golgi, plastid	26.94	6.22
TraesCS5D01G113700.1	Wheat	mitochondrion, plastid	27.98	5.64
CDY06545	Canola	cytosol	0.52	1.64
CDY06546	Canola	cytosol	0.52	1.35
TraesCS5D01G258800.1	Wheat	cytosol	1.04	0.8

Protein Annotations

Gene3D:3.30.565.10	Gene3D:3.40.50.1380	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987
GO:GO:0051082	InterPro:HATPase_C_sf	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890
InterPro:IPR036914	InterPro:MGS-like_dom	InterPro:MGS-like_dom_sf	PFAM:PF02142	PRINTS:PR00775	ScanProsite:PS00298
PANTHER:PTHR11528	PANTHER:PTHR11528:SF72	SUPFAM:SSF52335	SUPFAM:SSF55874	EnsemblPlantsGene:TraesCS6D01G046900	EnsemblPlants:TraesCS6D01G046900.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:21352165..21356137

Molecular Weight (calculated)

20911.6 Da

IEP (calculated)

5.997

GRAVY (calculated)

-0.149

Length

193 amino acids

Sequence
(BLAST)

001: MSHVASRLSS ATVGGPAPDH DHHPIHPPIF PQVSFREVVA GEQEQKAMAD VQMGSGTETE TFAFQAEINQ LLLLIINTFY SNKEIFLRDL ISNSSDALDK
101: IWFESLTDKS QWQTMRTTWA PSWARAPRSS WRLCRAGAVA APAGVKQALI SLSDTTDLAN LGNNLQSLGF SIISTGGTAS SLEAAGVNVR KVE

Best Arabidopsis Sequence Match ( AT5G56000.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KTNNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VADKVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGEALGR GTKMILYLKE DQMEYIEERR LKDLVKKHSE
201: FISYPISLWI EKTIEKEISD DEEEEEKKDE EGKVEEIDEE KEKEEKKKKK IKEVTHEWDL VNKQKPIWMR KPEEINKEEY AAFYKSLSND WEEHLAVKHF
301: SVEGQLEFKA ILFVPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCEDIIP DYLGFVKGIV DSEDLPLNIS RETLQQNKIL KVIRKNLVKK CLELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRTKI AELLRYHSTK SGDELTSLKD YVTRMKEGQN EIFYITGESK KAVENSPFLE KLKKKGYEVL YMVDAIDEYA
501: IGQLKEFEGK KLVSATKEGL KLEETDDEKK KKEELKEKFE GLCKVIKDVL GDKVEKVIVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL KDSNTGGYMS
601: SKKTMEINPE NSIMDELRKR AEADKNDKSV KDLVLLLFET ALLTSGFSLD EPNTFGSRIH RMLKLGLSIE EDDAVEADAE MPPLEDDADA EGSKMEEVD

Arabidopsis Description

HSP90-4Hsp81.4 [Source:UniProtKB/TrEMBL;Acc:A0A178UQ52]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.