CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11962	Canola	cytosol	73.77	31.03
CDY36775	Canola	cytosol	73.77	30.61
CDY36771	Canola	cytosol	73.77	30.61
CDY22598	Canola	cytosol	83.61	10.74
CDY66280	Canola	cytosol	36.07	9.87
CDY64982	Canola	cytosol	75.41	8.38
CDY20742	Canola	cytosol	75.41	8.35
CDY06551	Canola	cytosol	75.41	8.03
CDY36807	Canola	cytosol	73.77	7.83
CDY11967	Canola	cytosol	73.77	7.81
CDY50297	Canola	plastid	68.85	6.6
CDY27839	Canola	cytosol	70.49	6.1
CDY11921	Canola	cytosol	50.82	5.77
CDY04167	Canola	plastid	36.07	2.88
CDX83528	Canola	plastid	36.07	2.81
CDY33122	Canola	plastid	36.07	2.81
CDY48069	Canola	plastid	36.07	2.8
CDY08910	Canola	endoplasmic reticulum	34.43	2.68
CDX92620	Canola	endoplasmic reticulum	34.43	2.65
CDY24830	Canola	endoplasmic reticulum	34.43	2.56
CDY34264	Canola	endoplasmic reticulum	34.43	2.55
CDY03477	Canola	endoplasmic reticulum	34.43	2.55
CDX99788	Canola	plastid	27.87	2.47
CDY10992	Canola	endoplasmic reticulum	34.43	2.41
CDY28017	Canola	mitochondrion	27.87	2.16
CDY35962	Canola	mitochondrion	27.87	2.12
CDY22132	Canola	mitochondrion	27.87	2.11
CDY06546	Canola	cytosol	1.64	1.35
CDY06544	Canola	cytosol	1.64	0.87
TraesCS6D01G046900.1	Wheat	cytosol	1.64	0.52
TraesCS3B01G595900.1	Wheat	plastid	1.64	0.36
CDY36772	Canola	cytosol	0.0	0.0
CDY36776	Canola	cytosol	0.0	0.0
CDY50296	Canola	cytosol	0.0	0.0
CDY11961	Canola	cytosol	0.0	0.0
CDY66279	Canola	mitochondrion	0.0	0.0
HORVU7Hr1G049340.2	Barley	cytosol	0.0	0.0
VIT_00s2341g00010.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.11260	MapMan:35.2	GO:A0A078EWW7	EnsemblPlants:CDY06545	ProteinID:CDY06545	ProteinID:CDY06545.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00122665001
InterPro:Hsp90_fam	PFAM:PF00183	PANTHER:PTHR11528	PANTHER:PTHR11528:SF71	UniParc:UPI0004EDD226	SEG:seg

Description

BnaC02g12690D

Coordinates

chrLK031971:+:246602..246842

Molecular Weight (calculated)

6934.5 Da

IEP (calculated)

9.022

GRAVY (calculated)

-0.520

Length

61 amino acids

Sequence
(BLAST)

1: MVDAIDEYAI GQLKEFEGKK LVSATKEGLK LDESEDEKKK KKELKEKLSS LTVLLIRRAV L

Best Arabidopsis Sequence Match ( AT5G56030.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KTNNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VADKVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGETLGR GTKMVLYLKE DQLEYLEERR LKDLVKKHSE
201: FISYPISLWI EKTIEKEISD DEEEEEKKDE EGKVEEVDEE KEKEEKKKKK IKEVSHEWDL VNKQKPIWMR KPEEINKEEY AAFYKSLSND WEEHLAVKHF
301: SVEGQLEFKA ILFVPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCEDIIP EYLGFVKGIV DSEDLPLNIS RETLQQNKIL KVIRKNLVKK CLELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRTKI AELLRYHSTK SGDELTSLKD YVTRMKEGQN DIFYITGESK KAVENSPFLE KLKKKGIEVL YMVDAIDEYA
501: IGQLKEFEGK KLVSATKEGL KLDETEDEKK KKEELKEKFE GLCKVIKDVL GDKVEKVIVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL RDSSMAGYMS
601: SKKTMEINPE NSIMDELRKR ADADKNDKSV KDLVLLLFET ALLTSGFSLD EPNTFGSRIH RMLKLGLSID DDDAVEADAE MPPLEDDADA EGSKMEEVD

Arabidopsis Description

HSP81-2Heat shock protein 81-2 [Source:UniProtKB/TrEMBL;Acc:F4K6B6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.