CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 8
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34264	Canola	endoplasmic reticulum	99.27	99.27
CDX92620	Canola	endoplasmic reticulum	93.8	97.35
CDY24830	Canola	endoplasmic reticulum	95.01	95.36
AT4G24190.1	Thale cress	endoplasmic reticulum	94.04	93.92
CDY08910	Canola	endoplasmic reticulum	89.05	93.49
CDY10992	Canola	endoplasmic reticulum	96.47	91.04
PGSC0003DMT400025743	Potato	extracellular	80.78	82.38
VIT_18s0001g14500.t01	Wine grape	endoplasmic reticulum	81.75	82.15
Solyc04g081570.2.1	Tomato	plastid	81.02	82.02
KRH05964	Soybean	endoplasmic reticulum	80.66	81.45
Os06t0716700-02	Rice	plasma membrane	79.81	80.79
GSMUA_Achr1P07620_001	Banana	endoplasmic reticulum	80.05	80.74
GSMUA_Achr7P17770_001	Banana	endoplasmic reticulum	79.68	80.47
Zm00001d036401_P001	Maize	plasma membrane	78.47	80.22
KXG20895	Sorghum	endoplasmic reticulum	78.47	79.93
Zm00001d014792_P003	Maize	plasma membrane	77.62	78.96
KRH17444	Soybean	nucleus	80.9	78.51
TraesCS7D01G517800.1	Wheat	golgi, plastid	77.13	75.84
Zm00001d009931_P001	Maize	cytosol	16.42	75.0
HORVU7Hr1G117000.1	Barley	plastid	77.49	71.09
CDY06544	Canola	cytosol	7.91	56.52
CDY11961	Canola	cytosol	23.48	53.02
CDY27839	Canola	cytosol	43.43	50.64
CDY11967	Canola	cytosol	35.04	50.0
CDY36772	Canola	cytosol	21.53	48.76
CDY36776	Canola	cytosol	21.53	48.76
CDY20742	Canola	cytosol	31.75	47.37
CDY64982	Canola	cytosol	31.63	47.36
CDY36807	Canola	cytosol	32.97	47.13
CDY66279	Canola	mitochondrion	25.06	47.03
CDY06551	Canola	cytosol	32.73	46.95
CDY50296	Canola	cytosol	3.53	46.77
CDY11921	Canola	cytosol	30.54	46.74
CDY22598	Canola	cytosol	26.76	46.32
CDY50297	Canola	plastid	34.55	44.65
CDX83528	Canola	plastid	40.39	42.4
CDY48069	Canola	plastid	40.51	42.31
CDY33122	Canola	plastid	39.9	41.89
CDY04167	Canola	plastid	38.44	41.36
CDY35962	Canola	mitochondrion	39.54	40.47
CDY22132	Canola	mitochondrion	39.17	40.05
CDY28017	Canola	mitochondrion	37.83	39.52
CDX99788	Canola	plastid	32.97	39.39
CDY36775	Canola	cytosol	6.2	34.69
CDY36771	Canola	cytosol	6.2	34.69
CDY06545	Canola	cytosol	2.55	34.43
CDY66280	Canola	cytosol	9.25	34.08
CDY11962	Canola	cytosol	5.84	33.1
CDY06546	Canola	cytosol	2.92	32.43

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
GO:A0A078EQZ4	EnsemblPlants:CDY03477	ProteinID:CDY03477	ProteinID:CDY03477.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00116141001	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196
HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298
PANTHER:PTHR11528	PANTHER:PTHR11528:SF73	InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211
SUPFAM:SSF55874	SignalP:SignalP-noTM	UniParc:UPI0004EC1870	SEG:seg	:	:

Description

BnaC01g16050D

Coordinates

chrLK031943:+:664619..668688

Molecular Weight (calculated)

94196.7 Da

IEP (calculated)

4.685

GRAVY (calculated)

-0.721

Length

822 amino acids

Sequence
(BLAST)

001: MRKRTLVSVL FLFSLLFLLP DQGRKLHANA EDSSDEVSDP PKVEEKLGGH GGLSTDSDVV HRESESISKK SLRSNAEKFE FQAEVSRLMD IIINSLYSNK
101: DIFLRELISN ASDALDKIRF LALTDKDVLG EGDNAKLEIQ IKLDKAKKIL SIRDRGIGMT KEDLIKNLGT IAKSGTSAFV EKMQSSGDLN LIGQFGVGFY
201: SAYLVADYIE VISKHNDDIQ HVWESKADGK FAVSEDTWNE PLGRGTEIRL HLRDEAGEYL EESKLKDLVK RYSEFINFPI NLWASKEVET EVPAEEDEST
301: EEETETTSTE EEKEEDAEDE DSEKKQKTKK VKETVYEWEL LNDVKAIWLR SPKEVTEEEY TKFYHSLSKD FSDEKPMAWS HFNAEGDVEF KAVLYVPPKA
401: AHDQYESYYN TNKANLKLYV RRVFISDEFD ELLPKYLSFL KGLVDSDTLP LNVSREMLQQ HSSLKTIKKK LIRKALDMIR KLAEEDPDEV HDDDKKDVEK
501: SGENDEKKGQ YTKFWNEFGK SIKLGIIEDA SNRNRLAKLL RFETTKSDGK LTSLDQYIKR MKKGQKDVFY ITGSSKEQLE KSPFLERLIK KGYEVIFFTD
601: PVDEYLMQYL MDYEDKKFQN VSKEGLKVGK DSKVKELKEA FKELTKWWKE SLASENVDDV KISNRLADTP CVVVTSKFGW SANMERIMQS QTLSDANKQA
701: YMRGKRVLEI NPRHPIIKEL KERVASDPED ESVKETAQLM YQTALIESGF ILNDPKDFAG RIYNSVKSSL KISPDAVAEE EVEAEETETS EEATETKSDD
801: LHGGLNIEAE PVEEETPTKD EL

Best Arabidopsis Sequence Match ( AT4G24190.1 )
(BLAST)

001: MRKRTLVSVL FLFSLLFLLP DQGRKLHANA EESSDDVTDP PKVEEKIGGH GGLSTDSDVV HRESESMSKK TLRSNAEKFE FQAEVSRLMD IIINSLYSNK
101: DIFLRELISN ASDALDKIRF LALTDKDVLG EGDTAKLEIQ IKLDKAKKIL SIRDRGIGMT KEDLIKNLGT IAKSGTSAFV EKMQSSGDLN LIGQFGVGFY
201: SAYLVADYIE VISKHNDDSQ YVWESKANGK FAVSEDTWNE PLGRGTEIRL HLRDEAGEYL EESKLKELVK RYSEFINFPI SLWASKEVET EVPVEEDESA
301: DEETETTSTE EEKEEDAEEE DGEKKQKTKK VKETVYEWEL LNDVKAIWLR SPKEVTEEEY TKFYHSLSKD FTDEKPMAWS HFNAEGDVEF KAVLYVPPKA
401: PHDLYESYYN SNKANLKLYV RRVFISDEFD ELLPKYLSFL KGLVDSDTLP LNVSREMLQQ HSSLKTIKKK LIRKALDMIR KLAEEDPDEI HDDEKKDVEK
501: SGENDEKKGQ YTKFWNEFGK SVKLGIIEDA ANRNRLAKLL RFETTKSDGK LTSLDQYIKR MKKSQKDIFY ITGSSKEQLE KSPFLERLIK KGYEVIFFTD
601: PVDEYLMQYL MDYEDKKFQN VSKEGLKVGK DSKDKELKEA FKELTKWWKG NLASENVDDV KISNRLADTP CVVVTSKFGW SANMERIMQS QTLSDANKQA
701: YMRGKRVLEI NPRHPIIKEL KDRIASDPED ESVKETAQLM YQTALIESGF ILTDPKDFAA RIYNSVKSGL NISPDAVADE EIEAAEEPET SEATETKSDD
801: LAGGLNIEAE PVEQQEENTK DEL

Arabidopsis Description

HSP90-7Endoplasmin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9STX5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.