CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36776	Canola	cytosol	66.11	97.8
CDY36772	Canola	cytosol	66.11	97.8
CDY20742	Canola	cytosol	97.02	94.56
CDY64982	Canola	cytosol	96.65	94.54
CDY36807	Canola	cytosol	99.44	92.87
CDY06551	Canola	cytosol	96.28	90.23
CDY11961	Canola	cytosol	60.89	89.84
CDY36775	Canola	cytosol	24.21	88.44
CDY36771	Canola	cytosol	24.02	87.76
CDY11962	Canola	cytosol	23.46	86.9
CDY11967	Canola	cytosol	93.11	86.81
CDY06544	Canola	cytosol	17.32	80.87
Bra028924.1-P	Field mustard	cytosol	93.48	71.82
GSMUA_Achr3P10970_001	Banana	cytosol, plasma membrane	74.67	67.97
PGSC0003DMT400037336	Potato	cytosol	88.27	67.81
KRH46427	Soybean	nucleus	88.27	67.81
CDY50296	Canola	cytosol	7.82	67.74
Solyc07g065840.2.1	Tomato	nucleus, plastid	88.08	67.67
Solyc12g015880.1.1	Tomato	nucleus	87.9	67.53
PGSC0003DMT400057003	Potato	cytosol	87.71	67.38
PGSC0003DMT400076601	Potato	cytosol	87.71	67.38
VIT_00s0194g00030.t01	Wine grape	cytosol	87.71	67.38
GSMUA_Achr9P12680_001	Banana	cytosol	69.83	67.2
GSMUA_Achr3P04010_001	Banana	cytosol	70.39	67.14
KRG98439	Soybean	nucleus	87.71	67.09
EES14299	Sorghum	cytosol	86.78	66.76
EER96954	Sorghum	cytosol	86.41	66.38
Zm00001d006008_P001	Maize	plastid	86.22	66.33
VIT_19s0015g01090.t01	Wine grape	cytosol	86.78	66.19
Zm00001d052855_P001	Maize	plasma membrane	86.03	66.09
Zm00001d031332_P007	Maize	cytosol	83.05	66.07
EER99075	Sorghum	cytosol	85.85	65.95
TraesCS5D01G268000.1	Wheat	cytosol	85.85	65.86
TraesCS5B01G258900.2	Wheat	golgi	85.85	65.86
TraesCS5A01G260600.3	Wheat	nucleus	85.66	65.71
TraesCS7D01G241100.1	Wheat	golgi	85.1	65.29
Os09t0482100-01	Rice	nucleus	84.92	65.24
Os09t0482400-01	Rice	nucleus	84.92	65.24
Os09t0482600-01	Rice	cytosol	84.92	65.24
TraesCS7B01G149200.1	Wheat	golgi	84.92	65.14
TraesCS7A01G242200.1	Wheat	cytosol, plastid, unclear	84.73	65.0
CDY22598	Canola	cytosol	55.68	62.95
HORVU5Hr1G072420.2	Barley	plasma membrane	85.47	62.88
CDY27839	Canola	cytosol	81.94	62.41
Os08t0500700-01	Rice	extracellular, plasma membrane, vacuole	80.45	62.25
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, unclear	72.25	62.08
GSMUA_Achr11P...	Banana	cytosol	66.67	62.05
Zm00001d020898_P002	Maize	cytosol	79.14	59.94
HORVU7Hr1G049370.2	Barley	cytosol, mitochondrion, plastid	65.36	53.67
CDY50297	Canola	plastid	62.2	52.52
CDY06545	Canola	cytosol	5.77	50.82
CDY06546	Canola	cytosol	6.7	48.65
GSMUA_Achr3P04050_001	Banana	cytosol	8.75	36.72
CDX92620	Canola	endoplasmic reticulum	46.0	31.19
CDY66279	Canola	mitochondrion	25.33	31.05
CDY24830	Canola	endoplasmic reticulum	47.11	30.89
CDY03477	Canola	endoplasmic reticulum	46.74	30.54
CDY08910	Canola	endoplasmic reticulum	44.51	30.52
CDY34264	Canola	endoplasmic reticulum	46.18	30.17
TraesCS5D01G258900.2	Wheat	plastid	42.83	29.45
CDX83528	Canola	plastid	42.09	28.86
CDY10992	Canola	endoplasmic reticulum	46.74	28.82
CDY48069	Canola	plastid	42.09	28.72
CDY33122	Canola	plastid	41.34	28.35
CDY04167	Canola	plastid	39.85	28.01
CDY28017	Canola	mitochondrion	40.22	27.45
CDY35962	Canola	mitochondrion	40.41	27.02
CDY22132	Canola	mitochondrion	40.04	26.74
CDX99788	Canola	plastid	33.52	26.16
CDY66280	Canola	cytosol	10.06	24.22
Os09t0534600-01	Rice	endoplasmic reticulum, golgi, plasma membrane	14.34	17.87
TraesCS5D01G258800.1	Wheat	cytosol	0.56	1.2

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.40.50.11260	GO:A0A078FF63
UniProt:A0A078FF63	EnsemblPlants:CDY11921	ProteinID:CDY11921	ProteinID:CDY11921.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00060765001	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196
PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528
PANTHER:PTHR11528:SF74	InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874
UniParc:UPI0004EE9593	SEG:seg	:	:	:	:

Description

BnaC03g13470DBnaC03g13470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FF63]

Coordinates

chrLK032015:-:458424..460946

Molecular Weight (calculated)

60993.4 Da

IEP (calculated)

4.506

GRAVY (calculated)

-0.501

Length

537 amino acids

Sequence
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KTNNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VADKVIVTTK HNDDEQYVWE SQAGGSFTVT RDTSGENGPS PQGGPVGTIE KEISDDEDEE EKKDEEGKVE
201: EVDEEKEKEE KKKKKIKEVS HEWDLVNKQK PIWMRKPEEI TKEEYAAFYK SLSNDWEEHL AVKHFSVEGQ LEFKAVLFVP KRAPFDLFDT KKKPNNIKLY
301: VRRVFIMDNC EDIIPEWLGF QNKILKVIRK NLVKKCLELF FEVAENKEDY NKTKIAELLR QEDIFYITGE SKKAVENSPF LEKLKKKGFE VLYMVDAIDE
401: YAIGQLKEFE GKKLVSATKE ELKEKFEGLC KVIKDVLGDK VEKVIVSDRV VDSPCCLVTG EYGWTANMER IMKAQALRDS SMAGYILDEP NTFGSRIHRM
501: LKLGLSIDED DAVEADAEMP PLEDDADAEG SKMEEVD

Best Arabidopsis Sequence Match ( AT5G52640.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIRLVPD KSNKTLSIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALQ AGADVSMIGQ FGVGFYSAYL VAEKVVVTTK HNDDEQYVWE SQAGGSFTVT RDVDGEPLGR GTKITLFLKD DQLEYLEERR LKDLVKKHSE
201: FISYPIYLWT EKTTEKEISD DEDEDEPKKE NEGEVEEVDE EKEKDGKKKK KIKEVSHEWE LINKQKPIWL RKPEEITKEE YAAFYKSLTN DWEDHLAVKH
301: FSVEGQLEFK AILFVPKRAP FDLFDTRKKL NNIKLYVRRV FIMDNCEELI PEYLSFVKGV VDSDDLPLNI SRETLQQNKI LKVIRKNLVK KCIEMFNEIA
401: ENKEDYTKFY EAFSKNLKLG IHEDSQNRGK IADLLRYHST KSGDEMTSFK DYVTRMKEGQ KDIFYITGES KKAVENSPFL ERLKKRGYEV LYMVDAIDEY
501: AVGQLKEYDG KKLVSATKEG LKLEDETEEE KKKREEKKKS FENLCKTIKE ILGDKVEKVV VSDRIVDSPC CLVTGEYGWT ANMERIMKAQ ALRDSSMSGY
601: MSSKKTMEIN PDNGIMEELR KRAEADKNDK SVKDLVMLLY ETALLTSGFS LDEPNTFAAR IHRMLKLGLS IDEDENVEED GDMPELEEDA AEESKMEEVD

Arabidopsis Description

HSP90-1Heat shock protein 90-1 [Source:UniProtKB/Swiss-Prot;Acc:P27323]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.