Factsheet for PGSC0003DMT400057003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

cytosol: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g065840.2.1	Tomato	nucleus, plastid	98.57	98.57
PGSC0003DMT400076601	Potato	cytosol	95.57	95.57
PGSC0003DMT400037336	Potato	cytosol	95.14	95.14
AT5G56010.1	Thale cress	cytosol	93.42	93.42
KRH46427	Soybean	nucleus	93.28	93.28
Bra028952.1-P	Field mustard	cytosol	93.13	93.13
CDY11961	Canola	cytosol	48.5	93.13
Bra028924.1-P	Field mustard	cytosol	92.99	92.99
VIT_00s0194g00030.t01	Wine grape	cytosol	92.85	92.85
KRG98439	Soybean	nucleus	93.13	92.73
Bra035599.1-P	Field mustard	cytosol	74.68	92.72
Bra035593.1-P	Field mustard	cytosol	88.98	92.56
Bra028948.1-P	Field mustard	cytosol	92.42	92.55
CDY11967	Canola	cytosol	75.82	92.01
AT5G56000.1	Thale cress	cytosol	91.85	91.85
VIT_19s0015g01090.t01	Wine grape	cytosol	91.99	91.34
CDY22598	Canola	cytosol	61.66	90.74
AT5G56030.2	Thale cress	cytosol	93.71	89.97
CDY36807	Canola	cytosol	72.39	88.0
CDY36771	Canola	cytosol	18.45	87.76
CDY11921	Canola	cytosol	67.38	87.71
CDY20742	Canola	cytosol	69.1	87.66
CDY64982	Canola	cytosol	68.81	87.61
CDY06551	Canola	cytosol	71.67	87.43
CDY36775	Canola	cytosol	18.31	87.07
CDY36776	Canola	cytosol	44.78	86.23
CDY36772	Canola	cytosol	44.78	86.23
PGSC0003DMT400024594	Potato	cytosol	86.7	86.08
CDY11962	Canola	cytosol	17.74	85.52
PGSC0003DMT400074377	Potato	cytosol	49.5	84.6
PGSC0003DMT400074374	Potato	cytosol	36.91	84.31
PGSC0003DMT400014217	Potato	cytosol	31.9	77.7
PGSC0003DMT400014812	Potato	cytosol	22.89	66.67
KRG94627	Soybean	cytosol	29.47	66.24
PGSC0003DMT400025743	Potato	extracellular	50.79	44.04
PGSC0003DMT400050556	Potato	cytosol, plastid	46.07	40.4
PGSC0003DMT400015734	Potato	mitochondrion	44.92	39.55

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
ProteinID:AAM22685	ProteinID:AAM22685.1	ProteinID:ABB55365	ProteinID:ABB55365.1	EMBL:AF500588	ncoils:Coil
EMBL:DQ252488	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C
InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890
InterPro:IPR037196	UniProt:M1C075	HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518	EnsemblPlantsGene:PGSC0003DMG400022159
PGSC:PGSC0003DMG400022159	EnsemblPlants:PGSC0003DMT400057003	PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528
PANTHER:PTHR11528:SF74	InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874
UniParc:UPI00029486AC	SEG:seg	:	:	:	:

Description

Heat shock cognate protein 80 [Source:PGSC_GENE;Acc:PGSC0003DMG400022159]

Coordinates

chr7:-:55809630..55813512

Molecular Weight (calculated)

80276.4 Da

IEP (calculated)

4.672

GRAVY (calculated)

-0.600

Length

699 amino acids

Sequence
(BLAST)

001: MSDIETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLEAQ PELFIHIIPD KTNNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEAIA AGADVSMIGQ FGVGFYSAYL VAEKVIVTTK HNDDEQYVWE SQAGGSFTVT RDTSGENLGR GTKMVLYLKE DQLEYLEERR LKDLIKKHSE
201: FISYPISLWV EKTIEKEISD DEEEEEKKDE EGKVEEVDED KEKEEKKKKK VKEVSNEWSL VNKQKPIWMR KPEEITKEEY AAFYKSLTND WEEHLAVKHF
301: SVEGQLEFKA VLFVPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCEELIP EYLSFVKGIV DSEDLPLNIS RETLQQNKIL KVIRKNLVKK CVELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRSKF AELLRYHSTK SGDEMTSLKD YVTRMKEGQN DIYYITGESK KAVENSPFLE KLKKKGYEVL YMVDAIDEYS
501: IGQLKEFEGK KLVSATKEGL KLDESEDEKK KQEELKEKFE GLCKVMKDVL GDKVEKVIVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL RDSSMAGYMS
601: SKKTMEINPE NSIMDELRKR ADADKNDKSV KDLVLLLFET ALLTSGFSLE EPNTFGNRIH RMLKLGLSID EESGDADADM PAFEDPEADA EGSKMEEVD

Best Arabidopsis Sequence Match ( AT5G56030.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KTNNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VADKVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGETLGR GTKMVLYLKE DQLEYLEERR LKDLVKKHSE
201: FISYPISLWI EKTIEKEISD DEEEEEKKDE EGKVEEVDEE KEKEEKKKKK IKEVSHEWDL VNKQKPIWMR KPEEINKEEY AAFYKSLSND WEEHLAVKHF
301: SVEGQLEFKA ILFVPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCEDIIP EYLGFVKGIV DSEDLPLNIS RETLQQNKIL KVIRKNLVKK CLELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRTKI AELLRYHSTK SGDELTSLKD YVTRMKEGQN DIFYITGESK KAVENSPFLE KLKKKGIEVL YMVDAIDEYA
501: IGQLKEFEGK KLVSATKEGL KLDETEDEKK KKEELKEKFE GLCKVIKDVL GDKVEKVIVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL RDSSMAGYMS
601: SKKTMEINPE NSIMDELRKR ADADKNDKSV KDLVLLLFET ALLTSGFSLD EPNTFGSRIH RMLKLGLSID DDDAVEADAE MPPLEDDADA EGSKMEEVD

Arabidopsis Description

HSP81-2Heat shock protein 81-2 [Source:UniProtKB/TrEMBL;Acc:F4K6B6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.