Factsheet for PGSC0003DMT400050556

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 7
endoplasmic reticulum 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

cytosol: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g010670.2.1	Tomato	plastid	96.61	97.84
VIT_01s0010g00680.t01	Wine grape	plastid	83.69	84.22
Bra026525.1-P	Field mustard	cytosol	57.34	83.39
KRH71021	Soybean	nucleus	82.94	83.25
KRH75182	Soybean	plastid	82.06	82.47
AT2G04030.1	Thale cress	plastid	80.3	82.05
CDY66279	Canola	mitochondrion	45.04	81.96
GSMUA_Achr3P28100_001	Banana	plastid	81.56	81.45
CDX83528	Canola	plastid	79.92	81.35
Bra025142.1-P	Field mustard	plastid	79.92	80.94
CDY48069	Canola	plastid	79.92	80.94
CDY66280	Canola	cytosol	22.58	80.72
CDY33122	Canola	plastid	79.17	80.59
CDY04167	Canola	plastid	76.54	79.84
Bra017360.1-P	Field mustard	plastid	77.04	79.53
GSMUA_Achr9P22700_001	Banana	plastid	79.42	79.52
TraesCS5B01G249000.2	Wheat	plastid	76.41	77.98
HORVU5Hr1G070720.1	Barley	plastid	76.16	77.92
TraesCS5A01G251000.1	Wheat	plastid	76.29	77.85
Zm00001d020827_P001	Maize	mitochondrion	77.67	77.67
EES14330	Sorghum	plastid	76.54	77.41
Zm00001d052809_P002	Maize	plastid	76.04	76.42
CDX99788	Canola	plastid	65.87	76.31
Os09t0474300-01	Rice	plastid	59.35	72.32
PGSC0003DMT400015734	Potato	mitochondrion	62.61	62.85
PGSC0003DMT400074374	Potato	cytosol	18.95	49.35
PGSC0003DMT400024594	Potato	cytosol	42.16	47.73
PGSC0003DMT400076601	Potato	cytosol	40.78	46.49
PGSC0003DMT400057003	Potato	cytosol	40.4	46.07
PGSC0003DMT400037336	Potato	cytosol	40.28	45.92
PGSC0003DMT400074377	Potato	cytosol	23.09	44.99
PGSC0003DMT400014217	Potato	cytosol	15.43	42.86
PGSC0003DMT400014812	Potato	cytosol	12.67	42.08
PGSC0003DMT400025743	Potato	extracellular	41.53	41.07

Protein Annotations

Gene3D:1.20.120.790	EntrezGene:102578539	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140
Gene3D:3.40.50.11260	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005773
GO:GO:0005774	GO:GO:0006457	GO:GO:0006810	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0009408	GO:GO:0009414	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009628
GO:GO:0009651	GO:GO:0009704	GO:GO:0009791	GO:GO:0009941	GO:GO:0009987	GO:GO:0010157
GO:GO:0016020	GO:GO:0042803	GO:GO:0045037	GO:GO:0051082	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196
UniProt:M1BQI2	HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518	EnsemblPlantsGene:PGSC0003DMG400019647	PGSC:PGSC0003DMG400019647
EnsemblPlants:PGSC0003DMT400050556	PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF41
InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	UniParc:UPI000296F20D
RefSeq:XP_006348634.1	SEG:seg	:	:	:	:

Description

Heat shock protein 90 [Source:PGSC_GENE;Acc:PGSC0003DMG400019647]

Coordinates

chr5:+:1091623..1099314

Molecular Weight (calculated)

90918.1 Da

IEP (calculated)

4.605

GRAVY (calculated)

-0.580

Length

797 amino acids

Sequence
(BLAST)

001: MAPVVSRSLT SSPMASVPYS PSFVLGSGST NRVCLKSTFL PRNNIKNGFL QSGLRWKQDK RDVGVVVRCE ASAVAEKEAS ETSGETHEYQ AEVSRLLDLI
101: VHSLYSHKEV FLRELVSNAS DALDKLRFLS LTEPSLLGDS SELEIRIKSD PDNGTITITD TGIGMTKEEL IDCLGTIAQS GTSKFLKALK ENKDLGADNG
201: LIGQFGVGFY SAFLVAQKVV VSTKSPRSDK QYVWEAEADS SSYVIREETN PENLLPRGTQ ITLFLRDDDK YEYSEPKKIQ DLVKNYSQFV SFPIYTWQEK
301: SRTIEVEEEE EPKEGEEKPE EEKKMTKKTK TEKYWDWELT NETKPIWMRN PKEVEKEQYQ EFYKKTFNEF LDPLAHTHFT TEGEVEFRSV LYIPGMAPLN
401: NEDVVNPKTK NIRLYVKRVF ISDDFDGELF PRYLSFVKGV VDSNDLPLNV SREILQESRI VRIMRKRLVR KTFDMIQDLS ESENKEDYKK FWENFGKFVK
501: LGCIEDTGNH KRITPLLRFF SSKSEEELIS LDDYVENMGE NQKAIYYLAT DSLQSARTAP FLEKLVQKGI EVLYLVEPID EVAIQNLQTY KEKKFVDISK
601: EDLELDDDDE VKDREAKQEY NLLCDWIKQQ LGDKVAKVQV SKRLSTSPCV LVSGKFGWSA NMERLMRAQT LGDTSTLEFM RGRRILEVNP DHPIIKDLNA
701: ACKNSPDSSD AKRAVELLFD TALISSGFTP DSPSELGGKI YEMMAMALGG RWGRFEEEET EASEEASTES DASSAEVVEP QVVEPSEVRT ESNDYWE

Best Arabidopsis Sequence Match ( AT2G04030.1 )
(BLAST)

001: MAPALSRSLY TSPLTSVPIT PVSSRLSHLR SSFLPHGGAL RTGVSCSWNL EKRCNRFAVK CDAAVAEKET TEEGSGEKFE YQAEVSRLLD LIVHSLYSHK
101: EVFLRELVSN ASDALDKLRF LSVTEPSLLG DGGDLEIRIK PDPDNGTITI TDTGIGMTKE ELIDCLGTIA QSGTSKFLKA LKENKDLGAD NGLIGQFGVG
201: FYSAFLVAEK VVVSTKSPKS DKQYVWESVA DSSSYLIREE TDPDNILRRG TQITLYLRED DKYEFAESTR IKNLVKNYSQ FVGFPIYTWQ EKSRTIEVEE
301: DEPVKEGEEG EPKKKKTTKT EKYWDWELAN ETKPLWMRNS KEVEKGEYNE FYKKAFNEFL DPLAHTHFTT EGEVEFRSIL YIPGMGPLNN EDVTNPKTKN
401: IRLYVKRVFI SDDFDGELFP RYLSFVKGVV DSDDLPLNVS REILQESRIV RIMRKRLIRK TFDMIQEISE SENKEDYKKF WENFGRFLKL GCIEDTGNHK
501: RITPLLRFFS SKNEEELTSL DDYIENMGEN QKAIYYLATD SLKSAKSAPF LEKLIQKDIE VLYLVEPIDE VAIQNLQTYK EKKFVDISKE DLELGDEDEV
601: KDREAKQEFN LLCDWIKQQL GDKVAKVQVS NRLSSSPCVL VSGKFGWSAN MERLMKAQAL GDTSSLEFMR GRRILEINPD HPIIKDLNAA CKNAPESTEA
701: TRVVDLLYDT AIISSGFTPD SPAELGNKIY EMMAMAVGGR WGRVEEEEES STVNEGDDKS GETEVVEPSE VRAESDPWQD

Arabidopsis Description

HSP90-5HSP90.5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPV7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.