Factsheet for TraesCS5B01G249000.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G251000.1	Wheat	plastid	99.1	99.1
HORVU5Hr1G070720.1	Barley	plastid	98.46	98.72
Zm00001d020827_P001	Maize	mitochondrion	89.37	87.58
Os09t0474300-01	Rice	plastid	67.22	80.28
Bra026525.1-P	Field mustard	cytosol	56.21	80.11
GSMUA_Achr3P28100_001	Banana	plastid	81.56	79.82
GSMUA_Achr9P22700_001	Banana	plastid	80.67	79.15
KRH71021	Soybean	nucleus	79.9	78.59
CDY66279	Canola	mitochondrion	43.92	78.31
KRH75182	Soybean	plastid	79.26	78.06
AT2G04030.1	Thale cress	plastid	77.21	77.31
CDY66280	Canola	cytosol	22.02	77.13
CDY33122	Canola	plastid	77.08	76.88
CDX83528	Canola	plastid	76.95	76.76
CDY48069	Canola	plastid	77.34	76.75
Bra025142.1-P	Field mustard	plastid	77.34	76.75
VIT_01s0010g00680.t01	Wine grape	plastid	77.72	76.64
PGSC0003DMT400050556	Potato	cytosol, plastid	77.98	76.41
Solyc05g010670.2.1	Tomato	plastid	76.82	76.24
CDY04167	Canola	plastid	73.75	75.39
Bra017360.1-P	Field mustard	plastid	74.52	75.39
CDX99788	Canola	plastid	63.64	72.24
TraesCS5B01G106300.1	Wheat	mitochondrion	61.72	58.57
TraesCS7B01G149200.1	Wheat	golgi	40.46	45.14
TraesCS5B01G258900.2	Wheat	golgi	40.33	45.0
TraesCS2B01G047400.1	Wheat	cytosol	40.33	44.24
TraesCS3B01G595900.1	Wheat	plastid	5.89	16.73

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005773
GO:GO:0005774	GO:GO:0006457	GO:GO:0006810	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0009408	GO:GO:0009414	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009628
GO:GO:0009651	GO:GO:0009704	GO:GO:0009791	GO:GO:0009941	GO:GO:0009987	GO:GO:0010157
GO:GO:0016020	GO:GO:0042803	GO:GO:0045037	GO:GO:0051082	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196
HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298
PANTHER:PTHR11528	PANTHER:PTHR11528:SF41	InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211
SUPFAM:SSF55874	EnsemblPlantsGene:TraesCS5B01G249000	EnsemblPlants:TraesCS5B01G249000.2	TIGR:cd00075	SEG:seg	:

Description

No Description!

Coordinates

chr5B:-:431074368..431078699

Molecular Weight (calculated)

88306.3 Da

IEP (calculated)

4.618

GRAVY (calculated)

-0.551

Length

781 amino acids

Sequence
(BLAST)

001: MAPALSRTLG PSSVAALRPS PSRGLPRAAL APQGRRPAGA RGVRWEAGRG RLVGARCASA VAEKAAGEEE EAAGEEFEYQ AEVSRLMDLI VHSLYSHKEV
101: FLRELVSNAS DALDKLRFLS VTDPSVLADG GDMEIRIKPD PDAGTITITD SGIGMTKDEL KDCLGTIAQS GTSKFLKALK ENKELGADNG LIGQFGVGFY
201: SAFLVAEKVV VSTKSPKTDK QYIWEAEANS SSYVIREETD PEKMLTRGTQ ITLFLREDDK YEFADPTRIQ GLVKNYSQFV SFPIFTWQEK SRTVEVEEEE
301: SKEAEETAEG EKEKKKKTIT EKYWDWELAN ETKPIWMRNP KEVEETEYNE FYKKAFNEFL DPLAHAHFTT EGEVEFRSVL YIPGMAPLSN EEIMNPKTKN
401: IRLYVKRVFI SDDFDGELFP RYLSFVKGVV DSNDLPLNVS REILQESRIV RIMRKRLVRK TFDMIQDIAD KDNKEDYKKF WESFGKFMKL GCIEDSGNQK
501: RLAPLLRFYS SKNETDLISL DQYVENMPET QKAIYYIATD SLQSAKTAPF LEKLLQKDIE VLYLIEPIDE VAIQNLQTYK EKKFVDISKE DLELGDEDED
601: KEETKQEYTL LCDWIKQQLG DKVAKVQISK RLSSSPCVLV SGKFGWSANM ERLMKAQTLG DTSSLEFMRG RRIFEINPDH PIVKDLSAAC KNEPESTEAK
701: RAVELLYETA LISSGYTPES PAELGGKIYE MMTIALGGRW GRSGTDEAET NADVDSSEGV VTEVVEPSEV RTENENDPWR D

Best Arabidopsis Sequence Match ( AT2G04030.1 )
(BLAST)

001: MAPALSRSLY TSPLTSVPIT PVSSRLSHLR SSFLPHGGAL RTGVSCSWNL EKRCNRFAVK CDAAVAEKET TEEGSGEKFE YQAEVSRLLD LIVHSLYSHK
101: EVFLRELVSN ASDALDKLRF LSVTEPSLLG DGGDLEIRIK PDPDNGTITI TDTGIGMTKE ELIDCLGTIA QSGTSKFLKA LKENKDLGAD NGLIGQFGVG
201: FYSAFLVAEK VVVSTKSPKS DKQYVWESVA DSSSYLIREE TDPDNILRRG TQITLYLRED DKYEFAESTR IKNLVKNYSQ FVGFPIYTWQ EKSRTIEVEE
301: DEPVKEGEEG EPKKKKTTKT EKYWDWELAN ETKPLWMRNS KEVEKGEYNE FYKKAFNEFL DPLAHTHFTT EGEVEFRSIL YIPGMGPLNN EDVTNPKTKN
401: IRLYVKRVFI SDDFDGELFP RYLSFVKGVV DSDDLPLNVS REILQESRIV RIMRKRLIRK TFDMIQEISE SENKEDYKKF WENFGRFLKL GCIEDTGNHK
501: RITPLLRFFS SKNEEELTSL DDYIENMGEN QKAIYYLATD SLKSAKSAPF LEKLIQKDIE VLYLVEPIDE VAIQNLQTYK EKKFVDISKE DLELGDEDEV
601: KDREAKQEFN LLCDWIKQQL GDKVAKVQVS NRLSSSPCVL VSGKFGWSAN MERLMKAQAL GDTSSLEFMR GRRILEINPD HPIIKDLNAA CKNAPESTEA
701: TRVVDLLYDT AIISSGFTPD SPAELGNKIY EMMAMAVGGR WGRVEEEEES STVNEGDDKS GETEVVEPSE VRAESDPWQD

Arabidopsis Description

HSP90-5HSP90.5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPV7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.