Factsheet for TraesCS2B01G047400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G414300.2
TraesCS2B01G433400.1
TraesCS2D01G411600.1
TraesCS3B01G255300.1
TraesCS3D01G227500.3
TraesCS5A01G134500.3
TraesCS5B01G131200.1
TraesCS5D01G139000.1
TraesCS7A01G360400.1
TraesCS7B01G267300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G52640.1	TraesCS7A01G360400.1	AT2G26150.1	19366428
AT5G52640.1	TraesCS7B01G267300.1	AT2G26150.1	19366428
AT5G52640.1	TraesCS5A01G134500.3	AT3G21640.1	12410806
AT5G52640.1	TraesCS5B01G131200.1	AT3G21640.1	12410806
AT5G52640.1	TraesCS5D01G139000.1	AT3G21640.1	12410806
AT5G52640.1	TraesCS3B01G255300.1	AT4G11260.1	18065690
AT5G52640.1	TraesCS3D01G227500.3	AT4G11260.1	18065690
AT5G52640.1	TraesCS2A01G414300.2	AT5G51700.1	18065690
AT5G52640.1	TraesCS2B01G433400.1	AT5G51700.1	18065690
AT5G52640.1	TraesCS2D01G411600.1	AT5G51700.1	18065690

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G033200.2	Wheat	golgi	97.61	97.61
TraesCS2A01G033700.1	Wheat	plastid	96.91	97.6
Os04t0107900-02	Rice	cytosol	32.16	91.97
EES11741	Sorghum	cytosol	91.01	90.5
Solyc03g007890.2.1	Tomato	cytosol, extracellular, nucleus, plastid	88.48	90.13
Zm00001d024903_P001	Maize	plasma membrane	90.17	89.92
PGSC0003DMT400024594	Potato	cytosol	88.62	89.63
AT5G52640.1	Thale cress	cytosol	88.06	89.57
GSMUA_Achr8P19130_001	Banana	cytosol	73.03	89.35
VIT_16s0050g01150.t01	Wine grape	cytosol	88.34	89.35
CDY27839	Canola	cytosol	88.34	89.22
Solyc06g036290.2.1	Tomato	nucleus, plastid	75.98	89.13
VIT_02s0025g00280.t01	Wine grape	cytosol	87.78	88.9
KRH08858	Soybean	nucleus	87.08	88.7
KRH38373	Soybean	nucleus	87.08	88.7
PGSC0003DMT400074377	Potato	cytosol	50.28	87.53
TraesCS7B01G149200.1	Wheat	golgi	84.83	86.29
PGSC0003DMT400074374	Potato	cytosol	36.94	85.95
TraesCS5B01G258900.2	Wheat	golgi	83.57	85.0
Bra003119.1-P	Field mustard	plastid	69.8	81.74
CDY50297	Canola	plastid	71.49	80.03
PGSC0003DMT400014217	Potato	cytosol	31.32	77.7
KRH04730	Soybean	cytosol	37.64	74.44
VIT_13s0106g00410.t01	Wine grape	cytosol	9.97	58.2
TraesCS5B01G249000.2	Wheat	plastid	44.24	40.33
TraesCS5B01G106300.1	Wheat	mitochondrion	41.85	36.21
VIT_05s0094g00110.t01	Wine grape	nucleus, peroxisome, plastid	11.38	30.22
TraesCS3B01G595900.1	Wheat	plastid	7.3	18.91

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C
InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890
InterPro:IPR037196	HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775
ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF74	InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	SUPFAM:SSF110942
SUPFAM:SSF54211	SUPFAM:SSF55874	EnsemblPlantsGene:TraesCS2B01G047400	EnsemblPlants:TraesCS2B01G047400.1	TIGR:cd00075	SEG:seg

Description

No Description!

Coordinates

chr2B:-:23580771..23583241

Molecular Weight (calculated)

81294.3 Da

IEP (calculated)

4.668

GRAVY (calculated)

-0.579

Length

712 amino acids

Sequence
(BLAST)

001: MATDVQMGGG AAEAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDAQ PELFIRLVPD KATKTLSIID SGVGMTKSDL
101: VNNLGTIARS GTKEFMEALQ AGADVSMIGQ FGVGFYSAYL VAEKVVVTTK HNDDEQYVWE SQAGGSFTVT LDTEGERLGR GTKITLFLKD DQLEYLEERR
201: LKDLVKKHSE FISYPIYLWT EKTTEKEISD DEDDDSAEKK EGEVEEVDDD SENKDKKKTK KVKEVSHEWA QINKQKPIWL RKPEEISKEE YASFYKSITN
301: DWEDHLAVKH FSVEGQLEFK AVLFVPRRAP FDLFDTRKKM NNIKLYVRRV FIMDNCEELI PEWLGFVKGV VDSDDLPLNI SRETLQQNKI LKVIRKNLVK
401: KCIELFFEIA ENKEDYAKFY EAFSKNLKLG VHEDSQNRAK LADLLRYHST KSGDELTSLK DYVTRMKEGQ KDIYYITGES RKAVENSPFL ERLKRRGYEV
501: LFMVDAIDEY AVGQLKEYDG KKLVSATKEG LKLDEETEEE KKRREEKKAA FEGLCKTIKD ILGDKVEKVV VSDRIVDSPC CLVTGEYGWT ANMERIMKAQ
601: ALRDSSMGAY MSSKKTMEIN PENGIMEELR KRADADRNDK SVKDLVMLLF ETALLTSGFS LDDPNTFAAR IHRMLKLGLN IDDSADGAEE EDADMAALEE
701: EGAEESKMEE VD

Best Arabidopsis Sequence Match ( AT5G52640.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIRLVPD KSNKTLSIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALQ AGADVSMIGQ FGVGFYSAYL VAEKVVVTTK HNDDEQYVWE SQAGGSFTVT RDVDGEPLGR GTKITLFLKD DQLEYLEERR LKDLVKKHSE
201: FISYPIYLWT EKTTEKEISD DEDEDEPKKE NEGEVEEVDE EKEKDGKKKK KIKEVSHEWE LINKQKPIWL RKPEEITKEE YAAFYKSLTN DWEDHLAVKH
301: FSVEGQLEFK AILFVPKRAP FDLFDTRKKL NNIKLYVRRV FIMDNCEELI PEYLSFVKGV VDSDDLPLNI SRETLQQNKI LKVIRKNLVK KCIEMFNEIA
401: ENKEDYTKFY EAFSKNLKLG IHEDSQNRGK IADLLRYHST KSGDEMTSFK DYVTRMKEGQ KDIFYITGES KKAVENSPFL ERLKKRGYEV LYMVDAIDEY
501: AVGQLKEYDG KKLVSATKEG LKLEDETEEE KKKREEKKKS FENLCKTIKE ILGDKVEKVV VSDRIVDSPC CLVTGEYGWT ANMERIMKAQ ALRDSSMSGY
601: MSSKKTMEIN PDNGIMEELR KRAEADKNDK SVKDLVMLLY ETALLTSGFS LDEPNTFAAR IHRMLKLGLS IDEDENVEED GDMPELEEDA AEESKMEEVD

Arabidopsis Description

HSP90-1Heat shock protein 90-1 [Source:UniProtKB/Swiss-Prot;Acc:P27323]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.