Factsheet for PGSC0003DMT400074374

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0107900-02	Rice	cytosol	71.9	88.35
PGSC0003DMT400014217	Potato	cytosol	69.28	73.87
GSMUA_Achr8P19130_001	Banana	cytosol	89.87	47.25
PGSC0003DMT400014812	Potato	cytosol	35.29	45.0
PGSC0003DMT400024594	Potato	cytosol	93.79	40.77
TraesCS2D01G033200.2	Wheat	golgi	86.6	37.22
PGSC0003DMT400076601	Potato	cytosol	84.64	37.05
TraesCS2B01G047400.1	Wheat	cytosol	85.95	36.94
PGSC0003DMT400057003	Potato	cytosol	84.31	36.91
TraesCS2A01G033700.1	Wheat	plastid	84.97	36.78
EES11741	Sorghum	cytosol	85.95	36.73
PGSC0003DMT400037336	Potato	cytosol	83.66	36.62
Zm00001d024903_P001	Maize	plasma membrane	85.29	36.55
PGSC0003DMT400025743	Potato	extracellular	52.94	20.1
PGSC0003DMT400050556	Potato	cytosol, plastid	49.35	18.95
PGSC0003DMT400015734	Potato	mitochondrion	46.41	17.88
PGSC0003DMT400074377	Potato	cytosol	1.31	0.98

Protein Annotations

MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:Heat_shock_protein_90_CS
InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	UniProt:M1CTL1	PFAM:PF00183	PFAM:PF02518
EnsemblPlantsGene:PGSC0003DMG401028907	PGSC:PGSC0003DMG401028907	EnsemblPlants:PGSC0003DMT400074374	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528
PANTHER:PTHR11528:SF74	InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	SUPFAM:SSF54211	SUPFAM:SSF55874	UniParc:UPI000296A364
SEG:seg	:	:	:	:	:

Description

Heat shock protein 83 [Source:PGSC_GENE;Acc:PGSC0003DMG401028907]

Coordinates

chr6:+:37879346..37881084

Molecular Weight (calculated)

34910.3 Da

IEP (calculated)

4.498

GRAVY (calculated)

-0.572

Length

306 amino acids

Sequence
(BLAST)

001: MADMQMAEAE TFAFQAEINQ LLSLIINTFY SNKEIFLREL ISNSSDALDK IRFESLTDKS KLDAQPELFI RLVPDKVNKT LSIIDSGIGM TKADLVNNLG
101: TIARSGTKEF MEALQAGADV SMIGQFGVGF YSAYLVAEKV IVTTKHNDDE QYIWESQAGG SFTVTRDVDG EQLGRGTKIT LFLKEDQLEY LEERRIKDLV
201: KKHSEFISYP IYLWTEKTTE KEISDDEDDE PKKEQEGDIE EVDEDKEKEK GKKKKIKEVS HEWQLINKQK PIWLRKPEEI TKEEYAAFYK SLTNDGGAPC
301: SQALLC

Best Arabidopsis Sequence Match ( AT5G52640.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIRLVPD KSNKTLSIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALQ AGADVSMIGQ FGVGFYSAYL VAEKVVVTTK HNDDEQYVWE SQAGGSFTVT RDVDGEPLGR GTKITLFLKD DQLEYLEERR LKDLVKKHSE
201: FISYPIYLWT EKTTEKEISD DEDEDEPKKE NEGEVEEVDE EKEKDGKKKK KIKEVSHEWE LINKQKPIWL RKPEEITKEE YAAFYKSLTN DWEDHLAVKH
301: FSVEGQLEFK AILFVPKRAP FDLFDTRKKL NNIKLYVRRV FIMDNCEELI PEYLSFVKGV VDSDDLPLNI SRETLQQNKI LKVIRKNLVK KCIEMFNEIA
401: ENKEDYTKFY EAFSKNLKLG IHEDSQNRGK IADLLRYHST KSGDEMTSFK DYVTRMKEGQ KDIFYITGES KKAVENSPFL ERLKKRGYEV LYMVDAIDEY
501: AVGQLKEYDG KKLVSATKEG LKLEDETEEE KKKREEKKKS FENLCKTIKE ILGDKVEKVV VSDRIVDSPC CLVTGEYGWT ANMERIMKAQ ALRDSSMSGY
601: MSSKKTMEIN PDNGIMEELR KRAEADKNDK SVKDLVMLLY ETALLTSGFS LDEPNTFAAR IHRMLKLGLS IDEDENVEED GDMPELEEDA AEESKMEEVD

Arabidopsis Description

HSP90-1Heat shock protein 90-1 [Source:UniProtKB/Swiss-Prot;Acc:P27323]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.