Factsheet for GSMUA_Achr8P19130_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr2P16660_001
GSMUA_Achr4P15560_001
GSMUA_Achr6P00960_001
GSMUA_Achr6P12690_001
GSMUA_Achr7P10850_001
GSMUA_Achr7P14290_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G52640.1	GSMUA_Achr2P16660_001	AT2G26150.1	19366428
AT5G52640.1	GSMUA_Achr6P00960_001	AT2G26150.1	19366428
AT5G52640.1	GSMUA_Achr6P12690_001	AT3G21640.1	12410806
AT5G52640.1	GSMUA_Achr4P15560_001	AT4G11260.1	18065690
AT5G52640.1	GSMUA_Achr7P10850_001	AT4G11260.1	18065690
AT5G52640.1	GSMUA_Achr7P14290_001	AT4G11260.1	18065690
AT5G52640.1	GSMUA_AchrUn_...	AT5G51700.1	18065690

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074374	Potato	cytosol	47.25	89.87
Os04t0107900-02	Rice	cytosol	37.11	86.75
GSMUA_Achr11P...	Banana	cytosol	80.93	81.63
GSMUA_Achr3P10970_001	Banana	cytosol, plasma membrane	82.65	81.53
Solyc06g036290.2.1	Tomato	nucleus, plastid	80.76	77.43
KRH38373	Soybean	nucleus	92.61	77.11
Solyc03g007890.2.1	Tomato	cytosol, extracellular, nucleus, plastid	92.1	76.68
VIT_02s0025g00280.t01	Wine grape	cytosol	92.61	76.67
KRH08858	Soybean	nucleus	91.92	76.54
PGSC0003DMT400024594	Potato	cytosol	91.92	75.99
VIT_16s0050g01150.t01	Wine grape	cytosol	91.58	75.71
CDY27839	Canola	cytosol	90.38	74.61
AT5G52640.1	Thale cress	cytosol	89.69	74.57
PGSC0003DMT400014217	Potato	cytosol	36.77	74.56
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, unclear	79.55	74.08
TraesCS2A01G033700.1	Wheat	plastid	89.86	73.97
TraesCS2D01G033200.2	Wheat	golgi	90.21	73.74
TraesCS2B01G047400.1	Wheat	cytosol	89.35	73.03
Zm00001d024903_P001	Maize	plasma membrane	89.35	72.83
EES11741	Sorghum	cytosol	88.66	72.07
GSMUA_Achr9P12680_001	Banana	cytosol	68.73	71.68
GSMUA_Achr3P04010_001	Banana	cytosol	68.9	71.23
KRH04730	Soybean	cytosol	40.72	65.83
Bra003119.1-P	Field mustard	plastid	68.04	65.13
CDY50297	Canola	plastid	70.27	64.31
PGSC0003DMT400074377	Potato	cytosol	44.67	63.57
VIT_13s0106g00410.t01	Wine grape	cytosol	11.68	55.74
GSMUA_Achr3P04050_001	Banana	cytosol	10.48	47.66
GSMUA_Achr1P07620_001	Banana	endoplasmic reticulum	50.86	36.32
GSMUA_Achr7P17770_001	Banana	endoplasmic reticulum	50.52	36.12
GSMUA_Achr3P28100_001	Banana	plastid	46.74	34.09
GSMUA_Achr9P22700_001	Banana	plastid	46.39	33.92
GSMUA_Achr10P...	Banana	mitochondrion	44.67	32.91
VIT_05s0094g00110.t01	Wine grape	nucleus, peroxisome, plastid	12.71	27.61

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr8G19130_001
EnsemblPlants:GSMUA_Achr8P19130_001	EnsemblPlants:GSMUA_Achr8T19130_001	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS
InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196	UniProt:M0TRR6	PFAM:PF00183
PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF74
InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	UniParc:UPI000294B4D5
SEG:seg	:	:	:	:	:

Description

Heat shock protein 83 [Source:GMGC_GENE;Acc:GSMUA_Achr8G19130_001]

Coordinates

chr8:+:24160971..24163726

Molecular Weight (calculated)

66912.9 Da

IEP (calculated)

4.609

GRAVY (calculated)

-0.711

Length

582 amino acids

Sequence
(BLAST)

001: MGETETFAFQ AEINQLLSLI INTFYSNKEI FLREIISNAS DALDKIRFES LTDKSKLDAQ PELFIRLVPD KANKTLSIID SGNGMTKADL VNNLGTIARS
101: GTKEFMEALQ AGADVSMIGQ FGVGFYSAYL VAEKVIVTTK HNDDEQYTWE SQAGGSFTVT RDTTGEQLGR GTKITLFLKE DQLEYLEERR IKDLVKKHSE
201: FISYPIYLWT EKTTEKEISD DEDEDNKKEE EGDIEEVDEE TEKKSKKKKV KEVSHEWQLI NKQKPIWLRK PEEITKEEYA SFYKSLTNDW EDHLAVKHFS
301: MNNIKLYVRR VFIMDNCEEL IPEYLGFVKG IAENKEDYNK FYEAFSKNLK LGIHEDSQNR AKLADLLRYH STKSGEEMTS LKDYVTRMKE GQTDIYYITG
401: ESKKAVENSP FLERLKKKGY EVLFMVDAID EYAVGQLKEY DGKKLVSATK EGLKLEETEE EKKRKEEKKA AFESLCKTMK EILGDKYGWT ANMERIMKAQ
501: ALRDTEADKN DKSVKDLVLL LFETALLTSG FSLEDPNTFA GRIHRMLKLG LNIDEGEAGG DDTDMPALEE DDNEESKMEE VD

Best Arabidopsis Sequence Match ( AT5G52640.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIRLVPD KSNKTLSIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALQ AGADVSMIGQ FGVGFYSAYL VAEKVVVTTK HNDDEQYVWE SQAGGSFTVT RDVDGEPLGR GTKITLFLKD DQLEYLEERR LKDLVKKHSE
201: FISYPIYLWT EKTTEKEISD DEDEDEPKKE NEGEVEEVDE EKEKDGKKKK KIKEVSHEWE LINKQKPIWL RKPEEITKEE YAAFYKSLTN DWEDHLAVKH
301: FSVEGQLEFK AILFVPKRAP FDLFDTRKKL NNIKLYVRRV FIMDNCEELI PEYLSFVKGV VDSDDLPLNI SRETLQQNKI LKVIRKNLVK KCIEMFNEIA
401: ENKEDYTKFY EAFSKNLKLG IHEDSQNRGK IADLLRYHST KSGDEMTSFK DYVTRMKEGQ KDIFYITGES KKAVENSPFL ERLKKRGYEV LYMVDAIDEY
501: AVGQLKEYDG KKLVSATKEG LKLEDETEEE KKKREEKKKS FENLCKTIKE ILGDKVEKVV VSDRIVDSPC CLVTGEYGWT ANMERIMKAQ ALRDSSMSGY
601: MSSKKTMEIN PDNGIMEELR KRAEADKNDK SVKDLVMLLY ETALLTSGFS LDEPNTFAAR IHRMLKLGLS IDEDENVEED GDMPELEEDA AEESKMEEVD

Arabidopsis Description

HSP90-1Heat shock protein 90-1 [Source:UniProtKB/Swiss-Prot;Acc:P27323]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.