Factsheet for Bra003119.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000557.1-P
Bra000741.1-P
Bra006895.1-P
Bra012823.1-P
Bra022561.1-P
Bra028270.1-P
Bra035239.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G52640.1	Bra000557.1-P	AT2G26150.1	19366428
AT5G52640.1	Bra006895.1-P	AT3G21640.1	12410806
AT5G52640.1	Bra012823.1-P	AT3G21640.1	12410806
AT5G52640.1	Bra000741.1-P	AT4G11260.1	18065690
AT5G52640.1	Bra035239.1-P	AT4G11260.1	18065690
AT5G52640.1	Bra022561.1-P	AT5G51700.1	18065690
AT5G52640.1	Bra028270.1-P	AT5G51700.1	18065690

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50297	Canola	plastid	94.9	90.72
AT5G52640.1	Thale cress	cytosol	87.66	76.14
KRH38373	Soybean	nucleus	85.53	74.39
KRH08858	Soybean	nucleus	85.03	73.96
Bra035599.1-P	Field mustard	cytosol	68.42	73.89
Solyc03g007890.2.1	Tomato	cytosol, extracellular, nucleus, plastid	84.54	73.53
PGSC0003DMT400024594	Potato	cytosol	84.7	73.15
VIT_16s0050g01150.t01	Wine grape	cytosol	84.54	73.01
VIT_02s0025g00280.t01	Wine grape	cytosol	83.72	72.4
TraesCS2A01G033700.1	Wheat	plastid	81.91	70.44
TraesCS2D01G033200.2	Wheat	golgi	82.24	70.22
TraesCS2B01G047400.1	Wheat	cytosol	81.74	69.8
Bra035593.1-P	Field mustard	cytosol	77.14	69.79
EES11741	Sorghum	cytosol	82.07	69.69
Bra028924.1-P	Field mustard	cytosol	79.61	69.24
Bra028952.1-P	Field mustard	cytosol	79.61	69.24
Zm00001d024903_P001	Maize	plasma membrane	81.25	69.19
Bra028948.1-P	Field mustard	cytosol	79.28	69.05
GSMUA_Achr8P19130_001	Banana	cytosol	65.13	68.04
Os04t0107900-02	Rice	cytosol	16.94	41.37
Bra026525.1-P	Field mustard	cytosol	30.92	34.31
Bra013774.1-P	Field mustard	endoplasmic reticulum	45.56	33.7
Bra025142.1-P	Field mustard	plastid	42.93	33.16
Bra017360.1-P	Field mustard	plastid	41.94	33.03
Bra010500.1-P	Field mustard	endoplasmic reticulum	42.11	32.57
Bra040027.1-P	Field mustard	mitochondrion	40.62	30.72
Bra029677.1-P	Field mustard	mitochondrion	35.36	29.61

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.40.50.11260	EnsemblPlantsGene:Bra003119
EnsemblPlants:Bra003119.1	EnsemblPlants:Bra003119.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605
GO:GO:0009607	GO:GO:0009816	GO:GO:0009987	GO:GO:0051082	GO:GO:0061077	InterPro:HATPase_C
InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196
UniProt:M4CFY7	PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775	PANTHER:PTHR11528
PANTHER:PTHR11528:SF74	InterPro:Ribosomal_S5_D2-typ_fold	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	UniParc:UPI0002543738
SEG:seg	:	:	:	:	:

Description

AT5G52640 (E=3e-228) HSP81-1, ATHS83, HSP81.1, HSP83, ATHSP90.1 | ATHSP90.1 (HEAT SHOCK PROTEIN 90.1); ATP binding / unfolded protein binding

Coordinates

chrA10:+:4984350..4986455

Molecular Weight (calculated)

69637.8 Da

IEP (calculated)

5.008

GRAVY (calculated)

-0.687

Length

608 amino acids

Sequence
(BLAST)

001: MDSLSSSLGW SQTRPTRRSL SSTGIGMTKA DLVNNLGTIA RSGTKEFMEA LQAGADVSMI GHFGVGFYSS YLVAEKVIVT TKHNDDEQYV WESQAGGSFT
101: VTRDVDGEPL GRGTKITLFL KEDQEISDDE DEDEAKKETE GEVEEVDEEK EKDGKKKKKI KEVSHEWELI NKQKPIWLRK PEEISKDEYA SFYKSLTNNW
201: EDHLAVKHFA VEGQLEFKVL LFVPKRAPFN LFDTRKKLNN IKLYVRRVFI MDNCEELIPE YLSFVKGVVD SDDLPLNISR ETLQQNKILK VIRKNLVKKC
301: LEMFNEIAEK KEDYNKFYDT FSKNLKLGIH EDSQNRSKIA DLLRYHSTKS ADEMTSLKDY VTRMKEGQKD IFYITGESKK AVENSPFLEK LKKRGYEVLY
401: MVDAIDEYAV GKLKKYDGKK LVSATKEGLK LEDETEEEKK KKEEKKKSFE NLCKTIKDIL GDKVEKVVVS DRIVYSPCCL VTGEYGWTAN MENIMKAKAL
501: RDSSMSGYMS SKKTMEINPD NGIMEELRKR AEVDKNDNSV KDLVMLLFET ALLTSGFSLD EPNTFAARIH RMLKLGLSID EDENVEEDGD MPALEEDAAE
601: ESKMEKVD

Best Arabidopsis Sequence Match ( AT2G04030.1 )
(BLAST)

001: MAPALSRSLY TSPLTSVPIT PVSSRLSHLR SSFLPHGGAL RTGVSCSWNL EKRCNRFAVK CDAAVAEKET TEEGSGEKFE YQAEVSRLLD LIVHSLYSHK
101: EVFLRELVSN ASDALDKLRF LSVTEPSLLG DGGDLEIRIK PDPDNGTITI TDTGIGMTKE ELIDCLGTIA QSGTSKFLKA LKENKDLGAD NGLIGQFGVG
201: FYSAFLVAEK VVVSTKSPKS DKQYVWESVA DSSSYLIREE TDPDNILRRG TQITLYLRED DKYEFAESTR IKNLVKNYSQ FVGFPIYTWQ EKSRTIEVEE
301: DEPVKEGEEG EPKKKKTTKT EKYWDWELAN ETKPLWMRNS KEVEKGEYNE FYKKAFNEFL DPLAHTHFTT EGEVEFRSIL YIPGMGPLNN EDVTNPKTKN
401: IRLYVKRVFI SDDFDGELFP RYLSFVKGVV DSDDLPLNVS REILQESRIV RIMRKRLIRK TFDMIQEISE SENKEDYKKF WENFGRFLKL GCIEDTGNHK
501: RITPLLRFFS SKNEEELTSL DDYIENMGEN QKAIYYLATD SLKSAKSAPF LEKLIQKDIE VLYLVEPIDE VAIQNLQTYK EKKFVDISKE DLELGDEDEV
601: KDREAKQEFN LLCDWIKQQL GDKVAKVQVS NRLSSSPCVL VSGKFGWSAN MERLMKAQAL GDTSSLEFMR GRRILEINPD HPIIKDLNAA CKNAPESTEA
701: TRVVDLLYDT AIISSGFTPD SPAELGNKIY EMMAMAVGGR WGRVEEEEES STVNEGDDKS GETEVVEPSE VRAESDPWQD

Arabidopsis Description

HSP90-5HSP90.5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPV7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.