Factsheet for Bra040027.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
endoplasmic reticulum 2
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22132	Canola	mitochondrion	99.88	99.88
Bra029677.1-P	Field mustard	mitochondrion	84.95	94.08
AT3G07770.3	Thale cress	mitochondrion	89.3	89.86
KRH74006	Soybean	mitochondrion	75.75	76.99
PGSC0003DMT400015734	Potato	mitochondrion	75.62	76.57
KRH14117	Soybean	mitochondrion	75.87	76.54
Solyc07g047790.2.1	Tomato	mitochondrion, nucleus, plastid	74.88	75.82
GSMUA_Achr10P...	Banana	mitochondrion	71.77	73.04
VIT_12s0057g00670.t01	Wine grape	cytosol	76.62	72.73
Os12t0514500-01	Rice	mitochondrion	69.65	69.05
Zm00001d035285_P003	Maize	extracellular	68.41	68.41
KXG23570	Sorghum	mitochondrion, plastid	68.53	68.28
Zm00001d041719_P001	Maize	mitochondrion	68.66	67.9
TraesCS5A01G101900.2	Wheat	mitochondrion	68.78	67.77
TraesCS5B01G106300.1	Wheat	mitochondrion	69.03	67.44
Bra026525.1-P	Field mustard	cytosol	43.91	64.42
HORVU5Hr1G027910.13	Barley	plastid	68.53	63.48
Bra025142.1-P	Field mustard	plastid	60.57	61.88
Bra017360.1-P	Field mustard	plastid	59.08	61.53
TraesCS5D01G113700.1	Wheat	mitochondrion, plastid	69.15	58.1
Bra035599.1-P	Field mustard	cytosol	31.47	44.94
Bra035593.1-P	Field mustard	cytosol	35.57	42.56
Bra028952.1-P	Field mustard	cytosol	36.82	42.35
Bra028924.1-P	Field mustard	cytosol	36.82	42.35
Bra028948.1-P	Field mustard	cytosol	36.32	41.83
Bra003119.1-P	Field mustard	plastid	30.72	40.62
Bra013774.1-P	Field mustard	endoplasmic reticulum	39.8	38.93
Bra010500.1-P	Field mustard	endoplasmic reticulum	37.44	38.3

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
EnsemblPlantsGene:Bra040027	EnsemblPlants:Bra040027.1	EnsemblPlants:Bra040027.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987
GO:GO:0051082	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N
InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196	UniProt:M4FG03	HAMAP:MF_00505	PFAM:PF00183
PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF41
InterPro:Ribosomal_S5_D2-typ_fold	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	UniParc:UPI000254475A	SEG:seg

Description

AT3G07770 (E=0.0) | ATP binding

Coordinates

chrA01:-:27862162..27866720

Molecular Weight (calculated)

91088.2 Da

IEP (calculated)

5.125

GRAVY (calculated)

-0.603

Length

804 amino acids

Sequence
(BLAST)

001: MLRLSKRSVS TLLRSGDRSF RVAAAAGTSI HRSSPSSTDA KRGEAESRWY SSLTNGKCRR SESLAHLNMK ANWFMGYRNE SSAAASDSSS QAPPPPPVEK
101: YEYQAEVSRL MDLIVNSLYS NKEVFLRELI SNASDALDKL RYLSVTDPDL SKDAADLDIR IYADKENGVI TLTDSGIGMT RQELVDCLGT IAQSGTAKFL
201: TALKDNKDAG GDNNLIGQFG VGFYSAFLVA DRVTVSTKSP KSDKQYVWEG EEGSSSYTIK EETDPQLIIP RGTRITLHLK PDYKGFADPE RVQKLVKNYS
301: QFVSFPIYTW QEKGYTKEVE VDDDPAESKQ DNQDDQAERK KKTKKVVERY WDWELTNETQ PIWLRNSKEV TTEEYNEFYR KTFNEYLDPL ASSHFTTEGE
401: VEFRSILYVP PVSPMGKDDV VNQKTKNIRL YVKRVFISDD FDGELFPRYL SFIKGVVDSH DLPLNVSREI LQESRIVRIM KKRLVKKAFD MILGISLSEN
501: REDYEKFWDN FGKHLKLGCI EDRENHKRLA PLLRFFSSQS ENDMISLDEY VENMKAEQKA IYYVASDSIT SAKNAPFLEK LLEKELEVLY LVEPIDEVAI
601: QSLKSYKDKD FIDISKEDLD LGKCDKNEEK EAAAKKEFGQ TCDWIKKRLG DKVASVQISS RLSSSPCVLV SGKFGWSANM ERLMKAQSAG DTTSLEFMKG
701: RRVFEINPDH SIIKNINAAY KSNPNDEDAM KAIDLMYDAA LVSSGFTPEN PAELGGKIYE MMDTALSGKW SSPEAQPQQH MAQSHNAELL EAEVVEPVEV
801: DGKK

Best Arabidopsis Sequence Match ( AT3G07770.2 )
(BLAST)

001: MIRLSKRSVS TLLRSGNQSF RIAAAASTSR SSPSATDVKR SDTESRWYSS LTNGQSKNSG SFAQLNMKTN WFMGYRNESS AAASDSSSQA PPPAEKFEYQ
101: AEVSRLMDLI VNSLYSNKEV FLRELISNAS DALDKLRYLS VTNPELSKDA PDLDIRIYAD KENGIITLTD SGIGMTRQEL VDCLGTIAQS GTAKFMKALK
201: DSKDAGGDNN LIGQFGVGFY SAFLVADRVI VSTKSPKSDK QYVWEGEANS SSFTIQEDTD PQSLIPRGTR ITLHLKQEAK NFADPERIQK LVKNYSQFVS
301: FPIYTWQEKG YTKEVEVEDD PTETKKDDQD DQTEKKKKTK KVVERYWDWE LTNETQPIWL RNPKEVTTAE YNEFYRKAFN EYLDPLASSH FTTEGEVEFR
401: SILYVPPVSP SGKDDIVNQK TKNIRLYVKR VFISDDFDGE LFPRYLSFVK GVVDSHDLPL NVSREILQES RIVRIMKKRL VRKAFDMILG ISLSENREDY
501: EKFWDNFGKH LKLGCIEDRE NHKRIAPLLR FFSSQSENDM ISLDEYVENM KPEQKAIYFI ASDSITSAKN APFLEKMLEK GLEVLYLVEP IDEVAVQSLK
601: AYKEKDFVDI SKEDLDLGDK NEEKEAAVKK EFGQTCDWIK KRLGDKVASV QISNRLSSSP CVLVSGKFGW SANMERLMKA QSTGDTISLD YMKGRRVFEI
701: NPDHSIIKNI NAAYNSNPND EDAMRAIDLM YDAALVSSGF TPDNPAELGG KIYEMMDVAL SGKWSSPEVQ PQQQQMAHSH DAETFEAEVV EPVEVDGKK

Arabidopsis Description

HSP90-6Heat shock protein 90-6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JFN3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.