Factsheet for Os12t0514500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
endoplasmic reticulum 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
mitochondrion: 23027867
plasma membrane: 27800704
plastid: 27992503

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G101900.2	Wheat	mitochondrion	86.68	86.15
TraesCS5B01G106300.1	Wheat	mitochondrion	86.93	85.66
KXG23570	Sorghum	mitochondrion, plastid	85.08	85.5
Zm00001d041719_P001	Maize	mitochondrion	83.6	83.39
Zm00001d035285_P003	Maize	extracellular	82.37	83.08
HORVU5Hr1G027910.13	Barley	plastid	86.56	80.88
GSMUA_Achr10P...	Banana	mitochondrion	73.24	75.19
TraesCS5D01G113700.1	Wheat	mitochondrion, plastid	87.3	73.98
KRH74006	Soybean	mitochondrion	71.52	73.32
PGSC0003DMT400015734	Potato	mitochondrion	70.9	72.42
KRH14117	Soybean	mitochondrion	71.02	72.27
Solyc07g047790.2.1	Tomato	mitochondrion, nucleus, plastid	70.53	72.04
AT3G07770.3	Thale cress	mitochondrion	69.17	70.21
VIT_12s0057g00670.t01	Wine grape	cytosol	73.24	70.13
Bra040027.1-P	Field mustard	mitochondrion	69.05	69.65
CDY22132	Canola	mitochondrion	68.93	69.53
CDY35962	Canola	mitochondrion	68.8	69.49
Bra029677.1-P	Field mustard	mitochondrion	61.41	68.59
CDY28017	Canola	mitochondrion	65.84	67.85
Os09t0474300-01	Rice	plastid	47.6	59.02
Os04t0107900-02	Rice	cytosol	13.07	42.57
Os09t0482600-01	Rice	cytosol	36.0	41.77
Os09t0482400-01	Rice	nucleus	36.0	41.77
Os09t0482100-01	Rice	nucleus	36.0	41.77
Os08t0500700-01	Rice	extracellular, plasma membrane, vacuole	34.16	39.91
Os06t0716700-02	Rice	plasma membrane	39.33	39.29
Os09t0534600-01	Rice	endoplasmic reticulum, golgi, plasma membrane	6.04	11.37

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
EntrezGene:4352339	ProteinID:ABG22029.1	ProteinID:BAF29901.1	ProteinID:BAT17360.1	ProteinID:BAT17361.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HSP90_C
InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196	HAMAP:MF_00505
EnsemblPlantsGene:Os12g0514500	EnsemblPlants:Os12t0514500-01	PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775
ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF41	UniProt:Q0IN14	InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387
SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	UniParc:UPI0000D89DEE	RefSeq:XP_015620006.1	SEG:seg

Description

Similar to Heat-shock protein precursor. (Os12t0514500-01);Similar to ATP binding. (Os12t0514500-02);Similar to ATP binding. (Os12t0514500-03)

Coordinates

chr12:-:19921684..19927728

Molecular Weight (calculated)

91485.0 Da

IEP (calculated)

4.956

GRAVY (calculated)

-0.543

Length

811 amino acids

Sequence
(BLAST)

001: MLGASRRSVC TAAAAAAAGS RRRAAAGVAS AVSGDSSVSS SSAPPRSVIN GEPGVPQLQK RLLSVLAAPK LTGTDNAASL KLREGSLVGR RYESSAAAVD
101: SSDTPPVEKH EYQAEVNRLM DLIVHSLYSN KEVFLRELVS NASDALDKLR YLSVTDPDLI KDGAGLDIRI QTDKENGIIT ITDTGIGMTR QELVDSLGTI
201: ASSGTAKFLK ALKESQEAGV DSNLIGQFGV GFYSAFLVSD KVAVSTKSPK SDKQYVWEGE AESSSYTIRE ETDPEKLLPR GTRLTLYLKR EDKGFAHPEK
301: IQKLVKNYSQ FVSFPIYTWQ EKGYTKEVEV DEPVEAKEGD DETKTEVKKK TKTVVEKYWD WELTNETQPI WLRNPREVST EEYNEFYKKT FNEYMDPLAS
401: SHFTTEGEVE FRSILYVPAT KKEDITDRKT KNIRLYVKRV FISDDFDGEL FPRYLSFVRG VVDSNDLPLN VSREILQESR IVRIMRKRLV RKAFDMILGI
501: SCSENRDDYE RFWENYGKFL KLGCMEDKEN HKRIAPLLRF FSSQSNEELI SLDEYVENMK PEQKDIYYIA ADSLSSAKHA PFLEKLNEKE YEVLFLVDPM
601: DEVSVTNLNS YKDKRFVDIS KEDLDLGDKN EEKEKEIKQE YSQTCDWIKK RLGEKVARVD ISNRLSSSPC VLVAAKFGWS ANMERLMRAQ SMGDMSSLDF
701: MRSRKVFEIN PEHEIIKGLN AACRANPDDP EALKAVDILF ETSMISSGFT PDNPAELSGK IYEMMSTAMA SKWASHAQPA EMNLQRDSPV SSEPIEAEVI
801: EPELVDDSQK K

Best Arabidopsis Sequence Match ( AT3G07770.2 )
(BLAST)

001: MIRLSKRSVS TLLRSGNQSF RIAAAASTSR SSPSATDVKR SDTESRWYSS LTNGQSKNSG SFAQLNMKTN WFMGYRNESS AAASDSSSQA PPPAEKFEYQ
101: AEVSRLMDLI VNSLYSNKEV FLRELISNAS DALDKLRYLS VTNPELSKDA PDLDIRIYAD KENGIITLTD SGIGMTRQEL VDCLGTIAQS GTAKFMKALK
201: DSKDAGGDNN LIGQFGVGFY SAFLVADRVI VSTKSPKSDK QYVWEGEANS SSFTIQEDTD PQSLIPRGTR ITLHLKQEAK NFADPERIQK LVKNYSQFVS
301: FPIYTWQEKG YTKEVEVEDD PTETKKDDQD DQTEKKKKTK KVVERYWDWE LTNETQPIWL RNPKEVTTAE YNEFYRKAFN EYLDPLASSH FTTEGEVEFR
401: SILYVPPVSP SGKDDIVNQK TKNIRLYVKR VFISDDFDGE LFPRYLSFVK GVVDSHDLPL NVSREILQES RIVRIMKKRL VRKAFDMILG ISLSENREDY
501: EKFWDNFGKH LKLGCIEDRE NHKRIAPLLR FFSSQSENDM ISLDEYVENM KPEQKAIYFI ASDSITSAKN APFLEKMLEK GLEVLYLVEP IDEVAVQSLK
601: AYKEKDFVDI SKEDLDLGDK NEEKEAAVKK EFGQTCDWIK KRLGDKVASV QISNRLSSSP CVLVSGKFGW SANMERLMKA QSTGDTISLD YMKGRRVFEI
701: NPDHSIIKNI NAAYNSNPND EDAMRAIDLM YDAALVSSGF TPDNPAELGG KIYEMMDVAL SGKWSSPEVQ PQQQQMAHSH DAETFEAEVV EPVEVDGKK

Arabidopsis Description

HSP90-6Heat shock protein 90-6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JFN3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.