Factsheet for PGSC0003DMT400015734

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

endoplasmic reticulum 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g047790.2.1	Tomato	mitochondrion, nucleus, plastid	97.36	97.36
KRH74006	Soybean	mitochondrion	80.23	80.53
KRH14117	Soybean	mitochondrion	80.73	80.43
VIT_12s0057g00670.t01	Wine grape	cytosol	81.86	76.74
GSMUA_Achr10P...	Banana	mitochondrion	76.07	76.46
AT3G07770.3	Thale cress	mitochondrion	76.7	76.22
CDY35962	Canola	mitochondrion	76.95	76.09
Bra029677.1-P	Field mustard	mitochondrion	69.27	75.76
Bra040027.1-P	Field mustard	mitochondrion	76.57	75.62
CDY22132	Canola	mitochondrion	76.45	75.5
CDY28017	Canola	mitochondrion	74.18	74.84
KXG23570	Sorghum	mitochondrion, plastid	72.42	71.25
Os12t0514500-01	Rice	mitochondrion	72.42	70.9
Zm00001d041719_P001	Maize	mitochondrion	71.79	70.11
TraesCS5A01G101900.2	Wheat	mitochondrion	72.04	70.1
Zm00001d035285_P003	Maize	extracellular	70.65	69.78
TraesCS5B01G106300.1	Wheat	mitochondrion	72.17	69.62
HORVU5Hr1G027910.13	Barley	plastid	72.29	66.13
PGSC0003DMT400050556	Potato	cytosol, plastid	62.85	62.61
TraesCS5D01G113700.1	Wheat	mitochondrion, plastid	72.42	60.08
PGSC0003DMT400074374	Potato	cytosol	17.88	46.41
PGSC0003DMT400057003	Potato	cytosol	39.55	44.92
PGSC0003DMT400024594	Potato	cytosol	39.8	44.89
PGSC0003DMT400037336	Potato	cytosol	39.42	44.78
PGSC0003DMT400076601	Potato	cytosol	39.29	44.64
PGSC0003DMT400074377	Potato	cytosol	22.04	42.79
PGSC0003DMT400014812	Potato	cytosol	12.59	41.67
PGSC0003DMT400014217	Potato	cytosol	14.99	41.46
PGSC0003DMT400025743	Potato	extracellular	41.06	40.45

Protein Annotations

Gene3D:1.20.120.790	EntrezGene:102591977	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140
Gene3D:3.40.50.11260	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C
InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890
InterPro:IPR037196	UniProt:M1A6G8	HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518	EnsemblPlantsGene:PGSC0003DMG401006147
PGSC:PGSC0003DMG401006147	EnsemblPlants:PGSC0003DMT400015734	PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528
PANTHER:PTHR11528:SF41	InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874
UniParc:UPI0002958D66	RefSeq:XP_006363008.1	SEG:seg	:	:	:

Description

Heat shock protein [Source:PGSC_GENE;Acc:PGSC0003DMG401006147]

Coordinates

chr7:-:44323491..44329636

Molecular Weight (calculated)

90493.7 Da

IEP (calculated)

4.980

GRAVY (calculated)

-0.568

Length

794 amino acids

Sequence
(BLAST)

001: MHRLSKRSVK SLLRSSTAAR YRDVAAPISS SHFFYQSADA DSKGRWYSVL TSGRCDVIES TKPFKTRNEP FLGCRFESTA AASDASDSPS EKFEYQAEVS
101: RLMDLIVNSL YSNKEVFLRE LISNASDALD KLRFLGVTEP ELLKDAVDLD IRIQTDKENG IITITDSGIG MTRQELVDCL GTIAQSGTAK FLKALKDSKD
201: AGADSNLIGQ FGVGFYSAFL VSERVEVSTK SPKSDKQYVW VGEANSSTYT IREETDPAKQ LPRGTRLTLY LKRDDKGYAH PERVEKLVKN YSQFVSFPIY
301: TWQEKGFTKE VEVDEDPAEA NKEGQDETAE KKKKTKKVVE KYWDWELTNE TQPIWLRSPK EVSKEEYNEF YKNTFNEYLE PLASSHFTTE GEVEFRSVLF
401: VPSVSGMGKD DMINPKTKNI RLYVKRVFIS DDFDGELFPR YLSFIKGVVD SNDLPLNVSR EILQESRIVR IMRKRLVRKA FEMIQGIALS ENRDDYETFW
501: ENFGKHLKLG CIEDRENHKR IAPLLRFFSS QSENEMISLD EYVENMKPDQ KDIYYIASDS VTSARNTPFL EKLLEKDLEV LFLVDPIDEV AVQNLKAFKE
601: KNFIDISKED LDLGDKNEDK EKEIKQEFGQ TCDWIKKRLG DKVASVQISN RLSSSPCVLV SGKFGWSANM ERLMKAQTVG DTSNLEFMRS RRVFEINPEH
701: PIIRTLTEAC RSTPDDEEAL RAIDLLYDAA LVSSGFTPEN PAQLGGKIYE MMNFALAGKW GTVSEYQQQA NQKPHIPETV EAEVVEPVEA GGQK

Best Arabidopsis Sequence Match ( AT3G07770.2 )
(BLAST)

001: MIRLSKRSVS TLLRSGNQSF RIAAAASTSR SSPSATDVKR SDTESRWYSS LTNGQSKNSG SFAQLNMKTN WFMGYRNESS AAASDSSSQA PPPAEKFEYQ
101: AEVSRLMDLI VNSLYSNKEV FLRELISNAS DALDKLRYLS VTNPELSKDA PDLDIRIYAD KENGIITLTD SGIGMTRQEL VDCLGTIAQS GTAKFMKALK
201: DSKDAGGDNN LIGQFGVGFY SAFLVADRVI VSTKSPKSDK QYVWEGEANS SSFTIQEDTD PQSLIPRGTR ITLHLKQEAK NFADPERIQK LVKNYSQFVS
301: FPIYTWQEKG YTKEVEVEDD PTETKKDDQD DQTEKKKKTK KVVERYWDWE LTNETQPIWL RNPKEVTTAE YNEFYRKAFN EYLDPLASSH FTTEGEVEFR
401: SILYVPPVSP SGKDDIVNQK TKNIRLYVKR VFISDDFDGE LFPRYLSFVK GVVDSHDLPL NVSREILQES RIVRIMKKRL VRKAFDMILG ISLSENREDY
501: EKFWDNFGKH LKLGCIEDRE NHKRIAPLLR FFSSQSENDM ISLDEYVENM KPEQKAIYFI ASDSITSAKN APFLEKMLEK GLEVLYLVEP IDEVAVQSLK
601: AYKEKDFVDI SKEDLDLGDK NEEKEAAVKK EFGQTCDWIK KRLGDKVASV QISNRLSSSP CVLVSGKFGW SANMERLMKA QSTGDTISLD YMKGRRVFEI
701: NPDHSIIKNI NAAYNSNPND EDAMRAIDLM YDAALVSSGF TPDNPAELGG KIYEMMDVAL SGKWSSPEVQ PQQQQMAHSH DAETFEAEVV EPVEVDGKK

Arabidopsis Description

HSP90-6Heat shock protein 90-6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JFN3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.