CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35962	Canola	mitochondrion	96.06	94.15
Bra029677.1-P	Field mustard	mitochondrion	86.53	93.8
CDY22132	Canola	mitochondrion	92.5	90.55
AT3G07770.3	Thale cress	mitochondrion	87.55	86.23
PGSC0003DMT400015734	Potato	mitochondrion	74.84	74.18
KRH74006	Soybean	mitochondrion	74.46	74.08
KRH14117	Soybean	mitochondrion	74.21	73.27
Solyc07g047790.2.1	Tomato	mitochondrion, nucleus, plastid	73.7	73.05
GSMUA_Achr10P...	Banana	mitochondrion	70.78	70.51
VIT_12s0057g00670.t01	Wine grape	cytosol	75.22	69.89
KXG23570	Sorghum	mitochondrion, plastid	67.73	66.05
Zm00001d035285_P003	Maize	extracellular	67.47	66.04
Os12t0514500-01	Rice	mitochondrion	67.85	65.84
Zm00001d041719_P001	Maize	mitochondrion	67.73	65.56
TraesCS5A01G101900.2	Wheat	mitochondrion	67.09	64.71
TraesCS5B01G106300.1	Wheat	mitochondrion	67.34	64.4
CDY66279	Canola	mitochondrion	34.94	62.79
HORVU5Hr1G027910.13	Barley	plastid	67.22	60.94
CDX83528	Canola	plastid	59.97	60.28
CDY33122	Canola	plastid	59.97	60.28
CDY48069	Canola	plastid	59.59	59.59
CDY04167	Canola	plastid	56.92	58.64
CDX99788	Canola	plastid	50.06	57.27
CDY66280	Canola	cytosol	15.76	55.61
TraesCS5D01G113700.1	Wheat	mitochondrion, plastid	67.47	55.49
CDY06544	Canola	cytosol	6.86	46.96
CDY50296	Canola	cytosol	3.43	43.55
CDY11961	Canola	cytosol	19.95	43.13
CDY27839	Canola	cytosol	37.74	42.13
CDY36772	Canola	cytosol	19.19	41.6
CDY36776	Canola	cytosol	19.19	41.6
CDY11967	Canola	cytosol	29.99	40.97
CDY06551	Canola	cytosol	29.61	40.66
CDY20742	Canola	cytosol	28.46	40.65
CDY64982	Canola	cytosol	28.34	40.62
CDY36807	Canola	cytosol	29.48	40.35
CDY11921	Canola	cytosol	27.45	40.22
CDY50297	Canola	plastid	31.89	39.47
CDY08910	Canola	endoplasmic reticulum	37.74	37.93
CDY03477	Canola	endoplasmic reticulum	39.52	37.83
CDY34264	Canola	endoplasmic reticulum	39.26	37.59
CDX92620	Canola	endoplasmic reticulum	37.61	37.37
CDY24830	Canola	endoplasmic reticulum	38.88	37.36
CDY22598	Canola	cytosol	21.73	36.0
CDY10992	Canola	endoplasmic reticulum	39.52	35.71
CDY36771	Canola	cytosol	6.35	34.01
CDY36775	Canola	cytosol	6.23	33.33
CDY11962	Canola	cytosol	5.84	31.72
CDY06545	Canola	cytosol	2.16	27.87
CDY06546	Canola	cytosol	1.78	18.92

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.40.50.11260	GO:A0A078GSB9
UniProt:A0A078GSB9	EnsemblPlants:CDY28017	ProteinID:CDY28017	ProteinID:CDY28017.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00038951001	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HSP90_C
InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196	HAMAP:MF_00505	PFAM:PF00183
PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775	PANTHER:PTHR11528	PANTHER:PTHR11528:SF41	InterPro:Ribosomal_S5_D2-typ_fold
SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	UniParc:UPI0004EF4734	SEG:seg	:

Description

BnaC05g44190DBnaC05g44190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSB9]

Coordinates

chrLK032213:-:269848..275005

Molecular Weight (calculated)

89247.4 Da

IEP (calculated)

5.287

GRAVY (calculated)

-0.587

Length

787 amino acids

Sequence
(BLAST)

001: MLRLSKRSVS TFLGSGERSL RVAAAATSIS RSSPSSTTDS KRGESESRWY SSLTNRKCMK HESLPQLNMK TNWFIMGYRN ESTAAASDSA SQAPPPVEKF
101: EYQAEVSRLL DLIVNSLYSN KEVFLRALIS NASDALDKLR YLSVTDPELS KDAADLDIRI YADKENGVIT LTDSGIGMTR QELVDCLGTI AQSGTAKFLK
201: ALKDNKDAGG DNNLIGQFGV GFYSAFLVAD RVTVSTKSPK SDKQYVWESE ADSRSYTIKE ETDPQLIIPR GTRITLHLKR DEKGFADPER IQKLEKGYTK
301: EVEVDDDPAE SRKDDQDDQT ERKKKTKKVV ERYWDWELTN ETQPIWLRNS KEVTTEEYNE FYRKTFNEYL DPLASSHFTT EGEVEFKSIL YVPPVSPMGK
401: DDVVNQKTKN IRLYVKRVFI SDDFDGELFP RYLSFIKGVV DSHDLPLNVS REILQESRIV RIMKKRLVKK AFDMILGISL SENREDYEKF WDNFGKHLKL
501: GCIEDRENHK RLAPLLRFFS SQSENDMISL DEYVENMKAE HKAIYYIASD SVTSAKNAPF PEKLMEKELE VLYLVEPIDE VAIQSLKSYK DKDFIDISKE
601: DLDLSKYKNE EKEAAVKKEF GQTCDWIKKR LGDKVASVQI SSRLSSSPCV LVSGKFGWSA NMERLMKAQA GGDTTSLEFM KGRRVFEINP EHSIIKSINA
701: AYKSNLNDED AMGAIDLMYD AALVSSGFTT ENPAELGGKI YEMMGIALSG KWSSSEVQPQ QQHMAHSHNA ELLEAEVVEP VEVDGKK

Best Arabidopsis Sequence Match ( AT3G07770.2 )
(BLAST)

001: MIRLSKRSVS TLLRSGNQSF RIAAAASTSR SSPSATDVKR SDTESRWYSS LTNGQSKNSG SFAQLNMKTN WFMGYRNESS AAASDSSSQA PPPAEKFEYQ
101: AEVSRLMDLI VNSLYSNKEV FLRELISNAS DALDKLRYLS VTNPELSKDA PDLDIRIYAD KENGIITLTD SGIGMTRQEL VDCLGTIAQS GTAKFMKALK
201: DSKDAGGDNN LIGQFGVGFY SAFLVADRVI VSTKSPKSDK QYVWEGEANS SSFTIQEDTD PQSLIPRGTR ITLHLKQEAK NFADPERIQK LVKNYSQFVS
301: FPIYTWQEKG YTKEVEVEDD PTETKKDDQD DQTEKKKKTK KVVERYWDWE LTNETQPIWL RNPKEVTTAE YNEFYRKAFN EYLDPLASSH FTTEGEVEFR
401: SILYVPPVSP SGKDDIVNQK TKNIRLYVKR VFISDDFDGE LFPRYLSFVK GVVDSHDLPL NVSREILQES RIVRIMKKRL VRKAFDMILG ISLSENREDY
501: EKFWDNFGKH LKLGCIEDRE NHKRIAPLLR FFSSQSENDM ISLDEYVENM KPEQKAIYFI ASDSITSAKN APFLEKMLEK GLEVLYLVEP IDEVAVQSLK
601: AYKEKDFVDI SKEDLDLGDK NEEKEAAVKK EFGQTCDWIK KRLGDKVASV QISNRLSSSP CVLVSGKFGW SANMERLMKA QSTGDTISLD YMKGRRVFEI
701: NPDHSIIKNI NAAYNSNPND EDAMRAIDLM YDAALVSSGF TPDNPAELGG KIYEMMDVAL SGKWSSPEVQ PQQQQMAHSH DAETFEAEVV EPVEVDGKK

Arabidopsis Description

HSP90-6Heat shock protein 90-6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JFN3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.