CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24830	Canola	endoplasmic reticulum	94.51	90.35
CDY34264	Canola	endoplasmic reticulum	93.87	89.42
CDY03477	Canola	endoplasmic reticulum	93.49	89.05
CDX92620	Canola	endoplasmic reticulum	89.27	88.26
AT4G24190.1	Thale cress	endoplasmic reticulum	89.91	85.54
CDY10992	Canola	endoplasmic reticulum	92.85	83.47
PGSC0003DMT400025743	Potato	extracellular	78.67	76.43
VIT_18s0001g14500.t01	Wine grape	endoplasmic reticulum	79.82	76.41
Solyc04g081570.2.1	Tomato	plastid	79.05	76.23
Os06t0716700-02	Rice	plasma membrane	78.8	75.99
KRH05964	Soybean	endoplasmic reticulum	78.67	75.68
Zm00001d036401_P001	Maize	plasma membrane	77.39	75.37
GSMUA_Achr1P07620_001	Banana	endoplasmic reticulum	78.42	75.34
KXG20895	Sorghum	endoplasmic reticulum	77.14	74.85
GSMUA_Achr7P17770_001	Banana	endoplasmic reticulum	77.78	74.82
Zm00001d014792_P003	Maize	plasma membrane	76.5	74.13
Zm00001d009931_P001	Maize	cytosol	16.99	73.89
KRH17444	Soybean	nucleus	78.8	72.85
TraesCS7D01G517800.1	Wheat	golgi, plastid	75.48	70.69
HORVU7Hr1G117000.1	Barley	plastid	75.86	66.29
CDY06544	Canola	cytosol	8.3	56.52
CDY11961	Canola	cytosol	23.24	50.0
CDY27839	Canola	cytosol	43.68	48.51
CDY11967	Canola	cytosol	35.25	47.92
CDY50296	Canola	cytosol	3.7	46.77
CDY22598	Canola	cytosol	27.97	46.11
CDY66279	Canola	mitochondrion	25.67	45.89
CDY36772	Canola	cytosol	21.2	45.73
CDY36776	Canola	cytosol	21.2	45.73
CDY20742	Canola	cytosol	31.8	45.19
CDY64982	Canola	cytosol	31.67	45.17
CDY36807	Canola	cytosol	33.08	45.04
CDY06551	Canola	cytosol	32.82	44.85
CDY11921	Canola	cytosol	30.52	44.51
CDY50297	Canola	plastid	34.87	42.92
CDX83528	Canola	plastid	41.63	41.63
CDY48069	Canola	plastid	41.76	41.55
CDY33122	Canola	plastid	41.0	41.0
CDY04167	Canola	plastid	39.59	40.58
CDY35962	Canola	mitochondrion	39.72	38.73
CDY22132	Canola	mitochondrion	39.34	38.31
CDX99788	Canola	plastid	33.46	38.08
CDY28017	Canola	mitochondrion	37.93	37.74
CDY06545	Canola	cytosol	2.68	34.43
CDY66280	Canola	cytosol	9.58	33.63
CDY36775	Canola	cytosol	6.26	33.33
CDY36771	Canola	cytosol	6.26	33.33
CDY11962	Canola	cytosol	5.87	31.72
CDY06546	Canola	cytosol	2.55	27.03

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
GO:A0A078F310	UniProt:A0A078F310	EnsemblPlants:CDY08910	ProteinID:CDY08910	ProteinID:CDY08910.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00000930001	InterPro:HATPase_C
InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890
InterPro:IPR037196	HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775
ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF73	InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	SUPFAM:SSF110942
SUPFAM:SSF54211	SUPFAM:SSF55874	SignalP:SignalP-noTM	UniParc:UPI0004EE78FD	SEG:seg	:

Description

BnaC08g11400DBnaC08g11400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F310]

Coordinates

chrLK031990:-:464583..468213

Molecular Weight (calculated)

89994.2 Da

IEP (calculated)

5.037

GRAVY (calculated)

-0.714

Length

783 amino acids

Sequence
(BLAST)

001: MRKRAIVSVL FLFSLLFLLP DQGRKLHANA EDSSDEVTDP PKVEKKLGGH GGLSTDSDVV RRLESESISK KSLRSSGEKF EFQAEVSRLM DIIINSLYSN
101: KDIFLRELIS NASDALDKIR FLALTDKDVL GEGDTAKLEI QIKLDKAKKI LSIRDRGIGM TKEDLIKNLG TIAQSGTSVG FYSAYLVADY IEVISKHSDD
201: NQHVWESKAD GKFTVSEDTW NEPLGRGTEI RLHLRDDAGG YLEGSKLKDL VKRYSEFINF PIHLWASKEV ETEVPVEEDE SAEEESETTS TEEEKEEDAE
301: EEDSEKKQKT KKVKETVHEW ELLNDVKAMW LRSPKEVTDE EYTKFYHSLA KDFSEEKPTA WSHFNAEGDV EFKAVLYVPP KAAHDQYESY YNSNKANLKL
401: FVRRVFISDE FDELLPKYLS FLKGLVDSDT LPLNVSREML QQHSSLKTIK KNLIRKTLDM IRKLAEEDPD EVHDDDKKDM EKSGENDEKK GQYTKFWKDF
501: GKSIKLGIIE DASNRNRLAK LLRFETTKSN GKLTSLDQYI KRMKKGQKDV FYITGSSKKQ LEKSPFLERL IKKGYEVIFF TDPVDEYLMQ YLMDYEDKKF
601: QNVSKEGLKV GKDSKVKELK EAFKDLTKWW KESLAGENVD DVKISNRLAD TLCVVVTSKF GWSANMERIM QSQTLSDAKK QAYMRGKRVL EINLRHPIIK
701: ELKDRVASDP EDGSVKETAQ LMYQTALIES GFILNDPKDF AGRIYNSVKS SLKISPDAVP EEEVEAEETE TSEEDEIRWW SEH

Best Arabidopsis Sequence Match ( AT4G24190.1 )
(BLAST)

001: MRKRTLVSVL FLFSLLFLLP DQGRKLHANA EESSDDVTDP PKVEEKIGGH GGLSTDSDVV HRESESMSKK TLRSNAEKFE FQAEVSRLMD IIINSLYSNK
101: DIFLRELISN ASDALDKIRF LALTDKDVLG EGDTAKLEIQ IKLDKAKKIL SIRDRGIGMT KEDLIKNLGT IAKSGTSAFV EKMQSSGDLN LIGQFGVGFY
201: SAYLVADYIE VISKHNDDSQ YVWESKANGK FAVSEDTWNE PLGRGTEIRL HLRDEAGEYL EESKLKELVK RYSEFINFPI SLWASKEVET EVPVEEDESA
301: DEETETTSTE EEKEEDAEEE DGEKKQKTKK VKETVYEWEL LNDVKAIWLR SPKEVTEEEY TKFYHSLSKD FTDEKPMAWS HFNAEGDVEF KAVLYVPPKA
401: PHDLYESYYN SNKANLKLYV RRVFISDEFD ELLPKYLSFL KGLVDSDTLP LNVSREMLQQ HSSLKTIKKK LIRKALDMIR KLAEEDPDEI HDDEKKDVEK
501: SGENDEKKGQ YTKFWNEFGK SVKLGIIEDA ANRNRLAKLL RFETTKSDGK LTSLDQYIKR MKKSQKDIFY ITGSSKEQLE KSPFLERLIK KGYEVIFFTD
601: PVDEYLMQYL MDYEDKKFQN VSKEGLKVGK DSKDKELKEA FKELTKWWKG NLASENVDDV KISNRLADTP CVVVTSKFGW SANMERIMQS QTLSDANKQA
701: YMRGKRVLEI NPRHPIIKEL KDRIASDPED ESVKETAQLM YQTALIESGF ILTDPKDFAA RIYNSVKSGL NISPDAVADE EIEAAEEPET SEATETKSDD
801: LAGGLNIEAE PVEQQEENTK DEL

Arabidopsis Description

HSP90-7Endoplasmin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9STX5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.