Factsheet for Solyc04g081570.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
endoplasmic reticulum 9
extracellular 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum, mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

plastid: 20363867
plastid: 22908117
nucleus: 25464976
plastid: 26371478
unclear: 26455813
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025743	Potato	extracellular	97.78	98.51
Zm00001d036401_P001	Maize	plasma membrane	80.67	81.47
GSMUA_Achr1P07620_001	Banana	endoplasmic reticulum	81.65	81.35
GSMUA_Achr7P17770_001	Banana	endoplasmic reticulum	81.4	81.2
KXG20895	Sorghum	endoplasmic reticulum	80.67	81.16
Os06t0716700-02	Rice	plasma membrane	81.16	81.16
CDY03477	Canola	endoplasmic reticulum	82.02	81.02
CDY34264	Canola	endoplasmic reticulum	81.9	80.9
Bra013774.1-P	Field mustard	endoplasmic reticulum	81.65	80.66
AT4G24190.1	Thale cress	endoplasmic reticulum	81.65	80.56
Zm00001d014792_P003	Maize	plasma membrane	79.8	80.2
CDX92620	Canola	endoplasmic reticulum	77.34	79.29
CDY08910	Canola	endoplasmic reticulum	76.23	79.05
CDY24830	Canola	endoplasmic reticulum	79.56	78.88
Bra010500.1-P	Field mustard	endoplasmic reticulum	75.49	77.99
TraesCS7D01G517800.1	Wheat	golgi, plastid	79.56	77.27
CDY10992	Canola	endoplasmic reticulum	80.79	75.32
Zm00001d009931_P001	Maize	cytosol	16.63	75.0
HORVU7Hr1G117000.1	Barley	plastid	79.93	72.43
Solyc06g036290.2.1	Tomato	nucleus, plastid	40.27	53.87
Solyc03g007890.2.1	Tomato	cytosol, extracellular, nucleus, plastid	44.46	51.65
Solyc12g015880.1.1	Tomato	nucleus	43.84	50.93
Solyc07g065840.2.1	Tomato	nucleus, plastid	43.47	50.5
Solyc05g010670.2.1	Tomato	plastid	40.76	42.06
Solyc07g047790.2.1	Tomato	mitochondrion, nucleus, plastid	40.15	41.06
Solyc04g081630.1.1	Tomato	cytosol	10.22	31.09

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005739	GO:GO:0005773	GO:GO:0005774	GO:GO:0005783	GO:GO:0005886
GO:GO:0006457	GO:GO:0006810	GO:GO:0006950	GO:GO:0008150	GO:GO:0009306	GO:GO:0009409
GO:GO:0009414	GO:GO:0009506	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009651
GO:GO:0009653	GO:GO:0009934	GO:GO:0009987	GO:GO:0010075	GO:GO:0016020	GO:GO:0016787
GO:GO:0016887	GO:GO:0034976	GO:GO:0040007	GO:GO:0046686	GO:GO:0048046	GO:GO:0051082
InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam
InterPro:IPR036890	InterPro:IPR037196	UniProt:K4BVN6	HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518
PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF73	InterPro:Ribosomal_S5_D2-typ_fold
SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc04g081570.2
EnsemblPlants:Solyc04g081570.2.1	UniParc:UPI000276606F	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4:-:65517183..65522718

Molecular Weight (calculated)

93358.8 Da

IEP (calculated)

4.624

GRAVY (calculated)

-0.716

Length

812 amino acids

Sequence
(BLAST)

001: MRKWKIPFVL FLLCLIYLVP DQGRKIQANA EADSDAPVDP PKVEEKFGAV PNGLSTDSDV AKREAESMSR KTLRASAEKF EFQAEVSRLM DILINSLYSN
101: KDIFLRELIS NASDALDKIR FLALTDKEVL GEGDNTKLEI QIKLDKEKKI LSIRDRGVGM TKEDLRKNLG TIAKSGTSAF VEKMQTSGDL NLIGQFGVGF
201: YSVYLVADYV EVISKHNDDK QYVWESKADG AFAISEDTWN EPLGRGTEIR LHLRDEAGEY LDELKLKELV KKYSEFINFP INLWASKEVE KEVPADEDES
301: VDEEETSEST SSEEEGEEED AEKAEDEKKP KTKTVKETTY EWELLNDMKA IWLRSPKEVT DEEYNKFYHS LAKDFSEDKP MAWSHFNAEG DVEFKAVLFI
401: PPKAPHDLYE SYYNTKQSNL KLYVRRVFIS DEFNELLPKY LNFLMGLVDS DTLPLNVSRE MLQQHSSLKT IKKKLIRKAL DMIRKLAEED PDETNDKEKR
501: DVEESSDENE KKGQYAKFWN EFGKSIKLGI IEDATNRNRL AKLLRFETTK SDGKLTSLDQ YISRMKSSQK DIFYITGASK EQLEKSPFLE RLNKKDYEVI
601: FFTDPVDEYL MQYLMDYEDK KFQNVSKEGL KLKDSKTKEL KESFKGLTKW WKNTLASDNV EDVKISSRLA DTPCVVVTSK YGWSAYMEKI MHSQTLSDAS
701: KQAYMRGKRV LEINPRHPII KALRERVVTD PEDESVKLTA KLIYQTALME SGFDLSDPKD FASHIYSSVK SSLNISPDAT VEEEEDEAEE PETETKAEEE
801: SASDESELKD EL

Best Arabidopsis Sequence Match ( AT4G24190.1 )
(BLAST)

001: MRKRTLVSVL FLFSLLFLLP DQGRKLHANA EESSDDVTDP PKVEEKIGGH GGLSTDSDVV HRESESMSKK TLRSNAEKFE FQAEVSRLMD IIINSLYSNK
101: DIFLRELISN ASDALDKIRF LALTDKDVLG EGDTAKLEIQ IKLDKAKKIL SIRDRGIGMT KEDLIKNLGT IAKSGTSAFV EKMQSSGDLN LIGQFGVGFY
201: SAYLVADYIE VISKHNDDSQ YVWESKANGK FAVSEDTWNE PLGRGTEIRL HLRDEAGEYL EESKLKELVK RYSEFINFPI SLWASKEVET EVPVEEDESA
301: DEETETTSTE EEKEEDAEEE DGEKKQKTKK VKETVYEWEL LNDVKAIWLR SPKEVTEEEY TKFYHSLSKD FTDEKPMAWS HFNAEGDVEF KAVLYVPPKA
401: PHDLYESYYN SNKANLKLYV RRVFISDEFD ELLPKYLSFL KGLVDSDTLP LNVSREMLQQ HSSLKTIKKK LIRKALDMIR KLAEEDPDEI HDDEKKDVEK
501: SGENDEKKGQ YTKFWNEFGK SVKLGIIEDA ANRNRLAKLL RFETTKSDGK LTSLDQYIKR MKKSQKDIFY ITGSSKEQLE KSPFLERLIK KGYEVIFFTD
601: PVDEYLMQYL MDYEDKKFQN VSKEGLKVGK DSKDKELKEA FKELTKWWKG NLASENVDDV KISNRLADTP CVVVTSKFGW SANMERIMQS QTLSDANKQA
701: YMRGKRVLEI NPRHPIIKEL KDRIASDPED ESVKETAQLM YQTALIESGF ILTDPKDFAA RIYNSVKSGL NISPDAVADE EIEAAEEPET SEATETKSDD
801: LAGGLNIEAE PVEQQEENTK DEL

Arabidopsis Description

HSP90-7Endoplasmin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9STX5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.