Factsheet for Solyc07g065840.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 2
cytosol 3
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 22908117
nucleus: 25464976
plastid: 26371478
unclear: 26455813
nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400057003	Potato	cytosol	98.57	98.57
Solyc12g015880.1.1	Tomato	nucleus	95.99	95.99
AT5G56010.1	Thale cress	cytosol	93.99	93.99
Bra035599.1-P	Field mustard	cytosol	75.39	93.61
Bra028924.1-P	Field mustard	cytosol	93.56	93.56
Bra028952.1-P	Field mustard	cytosol	93.42	93.42
CDY11961	Canola	cytosol	48.64	93.41
KRH46427	Soybean	nucleus	93.28	93.28
Bra035593.1-P	Field mustard	cytosol	89.56	93.15
Bra028948.1-P	Field mustard	cytosol	92.99	93.12
GSMUA_Achr3P10970_001	Banana	cytosol, plasma membrane	78.54	93.05
VIT_00s0194g00030.t01	Wine grape	cytosol	92.85	92.85
KRG98439	Soybean	nucleus	93.13	92.73
AT5G56000.1	Thale cress	cytosol	92.42	92.42
EES14299	Sorghum	cytosol	92.27	92.41
CDY11967	Canola	cytosol	76.11	92.36
Zm00001d031332_P007	Maize	cytosol	88.98	92.15
TraesCS5B01G258900.2	Wheat	golgi	92.27	92.14
TraesCS5D01G268000.1	Wheat	cytosol	92.27	92.14
TraesCS5A01G260600.3	Wheat	nucleus	92.13	92.0
VIT_19s0015g01090.t01	Wine grape	cytosol	92.42	91.76
Zm00001d006008_P001	Maize	plastid	91.56	91.69
Os09t0482100-01	Rice	nucleus	91.56	91.56
Zm00001d052855_P001	Maize	plasma membrane	91.56	91.56
EER96954	Sorghum	cytosol	91.56	91.56
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, unclear	81.83	91.52
EER99075	Sorghum	cytosol	91.42	91.42
Os09t0482600-01	Rice	cytosol	91.42	91.42
Os09t0482400-01	Rice	nucleus	91.42	91.42
GSMUA_Achr9P12680_001	Banana	cytosol	72.68	91.04
CDY22598	Canola	cytosol	61.8	90.95
GSMUA_Achr11P...	Banana	cytosol	74.96	90.81
AT5G56030.2	Thale cress	cytosol	94.28	90.52
GSMUA_Achr3P04010_001	Banana	cytosol	72.82	90.41
TraesCS7D01G241100.1	Wheat	golgi	90.27	90.14
TraesCS7A01G242200.1	Wheat	cytosol, plastid, unclear	90.27	90.14
TraesCS7B01G149200.1	Wheat	golgi	90.13	90.0
CDY20742	Canola	cytosol	69.96	88.75
CDY64982	Canola	cytosol	69.67	88.71
CDY36807	Canola	cytosol	72.96	88.7
CDY36771	Canola	cytosol	18.6	88.44
HORVU5Hr1G072420.2	Barley	plasma membrane	92.27	88.36
Os08t0500700-01	Rice	extracellular, plasma membrane, vacuole	87.7	88.33
CDY06551	Canola	cytosol	72.25	88.13
CDY11921	Canola	cytosol	67.67	88.08
CDY36775	Canola	cytosol	18.45	87.76
CDY36776	Canola	cytosol	45.21	87.05
CDY36772	Canola	cytosol	45.21	87.05
Solyc06g036290.2.1	Tomato	nucleus, plastid	75.39	86.82
Solyc03g007890.2.1	Tomato	cytosol, extracellular, nucleus, plastid	86.55	86.55
CDY11962	Canola	cytosol	17.88	86.21
Zm00001d020898_P002	Maize	cytosol	86.41	85.19
HORVU7Hr1G049370.2	Barley	cytosol, mitochondrion, plastid	75.11	80.28
GSMUA_Achr3P04050_001	Banana	cytosol	13.02	71.09
KRG94627	Soybean	cytosol	29.33	65.92
Solyc04g081570.2.1	Tomato	plastid	50.5	43.47
TraesCS5D01G258900.2	Wheat	plastid	46.07	41.23
Solyc05g010670.2.1	Tomato	plastid	46.21	41.04
Solyc07g047790.2.1	Tomato	mitochondrion, nucleus, plastid	45.78	40.3
Os09t0534600-01	Rice	endoplasmic reticulum, golgi, plasma membrane	14.59	23.67
Solyc04g081630.1.1	Tomato	cytosol	9.01	23.6
TraesCS5D01G258800.1	Wheat	cytosol	0.43	1.2

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
ProteinID:AAB01376.1	EMBL:AY368907	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C
InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890
InterPro:IPR037196	HAMAP:MF_00505	UniProt:P36181	PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583
PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF74	UniProt:Q53Z32	InterPro:Ribosomal_S5_D2-typ_fold
SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	EnsemblPlantsGene:Solyc07g065840.2	EnsemblPlants:Solyc07g065840.2.1
UniParc:UPI000012CCA1	SEG:seg	:	:	:	:

Description

HSC80Molecular chaperone Hsp90-2 [Source:UniProtKB/TrEMBL;Acc:Q53Z32]

Coordinates

chr7:-:67435076..67438796

Molecular Weight (calculated)

80140.3 Da

IEP (calculated)

4.671

GRAVY (calculated)

-0.597

Length

699 amino acids

Sequence
(BLAST)

001: MSDVETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KANNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VAEKVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGENLGR GTKMVLYLKE DQLEYLEERR LKDLIKKHSE
201: FISYPISLWV EKTIEKEISD DEEEEEKKDE EGKVEEVDEE KEKEEKKKKK VKEVSNEWSL VNKQKPIWMR KPEEITKEEY AAFYKSLTND WEEHLAVKHF
301: SVEGQLEFKA VLFVPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCDELIP EYLSFVKGIV DSEDLPLNIS RETLQQNKIL KVIRKNLVKK CVELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRAKF AELLRYHSTK SGDEMTSLKD YVTRMKEGQN DIYYITGESK KAVENSPFLE KLKKKGYEVL YMVDAIDEYS
501: IGQLKEFEGK KLVSATKEGL KLDESEDEKK KQEELKEKFE GLCKVMKDVL GDKVEKVIVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL RDSSMAGYMS
601: SKKTMEINPE NSIMDELRKR ADADKNDKSV KDLVLLLFET ALLTSGFSLE EPNTFGNRIH RMLKLGLSID EESGDADADM PALEDPEADA EGSKMEEVD

Best Arabidopsis Sequence Match ( AT5G56030.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KTNNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VADKVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGETLGR GTKMVLYLKE DQLEYLEERR LKDLVKKHSE
201: FISYPISLWI EKTIEKEISD DEEEEEKKDE EGKVEEVDEE KEKEEKKKKK IKEVSHEWDL VNKQKPIWMR KPEEINKEEY AAFYKSLSND WEEHLAVKHF
301: SVEGQLEFKA ILFVPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCEDIIP EYLGFVKGIV DSEDLPLNIS RETLQQNKIL KVIRKNLVKK CLELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRTKI AELLRYHSTK SGDELTSLKD YVTRMKEGQN DIFYITGESK KAVENSPFLE KLKKKGIEVL YMVDAIDEYA
501: IGQLKEFEGK KLVSATKEGL KLDETEDEKK KKEELKEKFE GLCKVIKDVL GDKVEKVIVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL RDSSMAGYMS
601: SKKTMEINPE NSIMDELRKR ADADKNDKSV KDLVLLLFET ALLTSGFSLD EPNTFGSRIH RMLKLGLSID DDDAVEADAE MPPLEDDADA EGSKMEEVD

Arabidopsis Description

HSP81-2Heat shock protein 81-2 [Source:UniProtKB/TrEMBL;Acc:F4K6B6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.