Factsheet for HORVU5Hr1G072420.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G057700.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56010.1	HORVU2Hr1G057700.2	AT5G66570.1	16619024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G260600.3	Wheat	nucleus	95.75	99.86
TraesCS5D01G268000.1	Wheat	cytosol	95.62	99.71
TraesCS5B01G258900.2	Wheat	golgi	95.62	99.71
EES14299	Sorghum	cytosol	91.51	95.7
Zm00001d031332_P007	Maize	cytosol	88.22	95.41
HORVU7Hr1G049340.2	Barley	cytosol	11.37	94.32
Zm00001d052855_P001	Maize	plasma membrane	90.27	94.28
GSMUA_Achr3P10970_001	Banana	cytosol, plasma membrane	74.79	92.54
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, unclear	79.18	92.48
Bra035599.1-P	Field mustard	cytosol	71.23	92.36
GSMUA_Achr9P12680_001	Banana	cytosol	70.55	92.29
Solyc07g065840.2.1	Tomato	nucleus, plastid	88.36	92.27
GSMUA_Achr3P04010_001	Banana	cytosol	70.82	91.83
AT5G56010.1	Thale cress	cytosol	87.81	91.7
Bra035593.1-P	Field mustard	cytosol	84.25	91.52
Bra028924.1-P	Field mustard	cytosol	87.53	91.42
Solyc12g015880.1.1	Tomato	nucleus	87.53	91.42
Bra028952.1-P	Field mustard	cytosol	87.4	91.27
Bra028948.1-P	Field mustard	cytosol	87.26	91.26
CDY11961	Canola	cytosol	45.48	91.21
GSMUA_Achr11P...	Banana	cytosol	72.05	91.16
CDY11967	Canola	cytosol	71.78	90.97
AT5G56000.1	Thale cress	cytosol	86.71	90.56
Os08t0500700-01	Rice	extracellular, plasma membrane, vacuole	85.89	90.35
CDY22598	Canola	cytosol	58.77	90.32
AT5G56030.2	Thale cress	cytosol	87.95	88.19
CDY36771	Canola	cytosol	17.67	87.76
CDY36775	Canola	cytosol	17.53	87.07
CDY64982	Canola	cytosol	65.48	87.07
CDY20742	Canola	cytosol	65.48	86.75
CDY06551	Canola	cytosol	68.08	86.74
CDY36807	Canola	cytosol	67.95	86.26
CDY11962	Canola	cytosol	16.99	85.52
CDY11921	Canola	cytosol	62.88	85.47
CDY36776	Canola	cytosol	42.05	84.57
CDY36772	Canola	cytosol	42.05	84.57
HORVU7Hr1G049370.2	Barley	cytosol, mitochondrion, plastid	74.52	83.18
KRH50203	Soybean	cytosol	22.6	54.28
HORVU5Hr1G070720.1	Barley	plastid	43.01	40.31
HORVU7Hr1G117000.1	Barley	plastid	47.81	38.95
HORVU5Hr1G027910.13	Barley	plastid	40.68	34.22

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
UniProt:A0A287RRB7	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
InterPro:HATPase_C	InterPro:HATPase_C_sf	EnsemblPlantsGene:HORVU5Hr1G072420	EnsemblPlants:HORVU5Hr1G072420.2	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS
InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196	HAMAP:MF_00505	PFAM:PF00183
PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF74
InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	UniParc:UPI000B46168D
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:535442554..535446369

Molecular Weight (calculated)

83673.4 Da

IEP (calculated)

4.765

GRAVY (calculated)

-0.635

Length

730 amino acids

Sequence
(BLAST)

001: LKTPPNPSRL PHASPPLRSA PHLEQLRDAA MATETETFAF QAEINQLLSL IINTFYSNKE IFLRELISNS SDALDKIRFE SLTDKSKLDA QPELFIHIIP
101: DKATSTLTIV DSGIGMTKSD LVNNLGTIAR SGTKEFMEAL AAGADVSMIG QFGVGFYSAY LVAERVVVTT KHNDDEQYVW ESQAGGSFTV TRDTSGEQLG
201: RGTKMVLYLK DDQMEYLEER RIKDLVKKHS EFISYPISLW TEKTTEKEIS DDEDEEEKKD TEEGKVEDVD EEKEEKEKKK KKIKEVSHEW NLVNKQKPIW
301: MRKPEEINKE EYAAFYKSLT NDWEEHLAVK HFSVEGQLEF KAVLFVPKRA PFDLFDNKKK ANNIKLYVRR VFIMDNCDEL IPEYLSFVKG IVDSEDLPLN
401: ISRETLQQNK ILKVIRKNLV KKCIELFFEI AENKEDYNKF YEAFSKNLKL GIHEDSQNRT KIAELLRYHS TKSGDELTSL KDYVTRMKEG QNEIYYITGE
501: SKKAVENSPF LEKLKKKGYE VIYMVDAIDE YAIGQLKEFE GKKLVSATKE GLKLDESEDE KKKQEELKEK FEGLCKVIKE VLGDKVEKVI VSDRVVDSPC
601: CLVTGEYGWT ANMERIMKAQ ALRDSSMAGY MSSKKTMEIN PENAIMDELR KRADADKNDK SVKDLVMLLF ETSLLTSGFS LEDPNTFGTR IHRMLKLGLS
701: IDEDDEAPEN DTDMPPLEDD AGESKMEEVD

Best Arabidopsis Sequence Match ( AT5G56000.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KTNNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VADKVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGEALGR GTKMILYLKE DQMEYIEERR LKDLVKKHSE
201: FISYPISLWI EKTIEKEISD DEEEEEKKDE EGKVEEIDEE KEKEEKKKKK IKEVTHEWDL VNKQKPIWMR KPEEINKEEY AAFYKSLSND WEEHLAVKHF
301: SVEGQLEFKA ILFVPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCEDIIP DYLGFVKGIV DSEDLPLNIS RETLQQNKIL KVIRKNLVKK CLELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRTKI AELLRYHSTK SGDELTSLKD YVTRMKEGQN EIFYITGESK KAVENSPFLE KLKKKGYEVL YMVDAIDEYA
501: IGQLKEFEGK KLVSATKEGL KLEETDDEKK KKEELKEKFE GLCKVIKDVL GDKVEKVIVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL KDSNTGGYMS
601: SKKTMEINPE NSIMDELRKR AEADKNDKSV KDLVLLLFET ALLTSGFSLD EPNTFGSRIH RMLKLGLSIE EDDAVEADAE MPPLEDDADA EGSKMEEVD

Arabidopsis Description

HSP90-4Hsp81.4 [Source:UniProtKB/TrEMBL;Acc:A0A178UQ52]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.