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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:nucleus
YLoc:cytosol
 plastid: 22065420
plastid: 23198870
plasma membrane: 23353019
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663
msms PMID: 23353019 doi
D Hopff, S Wienkoop, S Lüthje
University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 23198870 doi
M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 22065420 doi
W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
msms PMID: 23508561 doi
Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck
Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d014564_P001
Zm00001d036535_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G56010.1 Zm00001d014564_P001 AT5G66570.1 16619024
AT5G56010.1 Zm00001d036535_P001 AT5G66570.1 16619024
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d031332_P007 Maize cytosol 94.99 98.37
Zm00001d006008_P001 Maize plastid 95.57 95.7
TraesCS5D01G268000.1 Wheat cytosol 94.56 94.43
TraesCS5B01G258900.2 Wheat golgi 94.56 94.43
TraesCS5A01G260600.3 Wheat nucleus 94.42 94.29
TraesCS7D01G241100.1 Wheat golgi 94.28 94.14
TraesCS7A01G242200.1 Wheat cytosol, plastid, unclear 94.28 94.14
TraesCS7B01G149200.1 Wheat golgi 94.13 94.0
GSMUA_Achr9P12680_001 Banana cytosol 74.68 93.55
GSMUA_Achr10P... Banana cytosol, plasma membrane, unclear 83.55 93.44
GSMUA_Achr3P10970_001 Banana cytosol, plasma membrane 78.54 93.05
GSMUA_Achr3P04010_001 Banana cytosol 74.68 92.72
GSMUA_Achr11P... Banana cytosol 76.25 92.37
Bra035599.1-P Field mustard cytosol 74.39 92.36
Bra035593.1-P Field mustard cytosol 88.41 91.96
Bra028924.1-P Field mustard cytosol 91.85 91.85
Solyc12g015880.1.1 Tomato nucleus 91.7 91.7
Bra028952.1-P Field mustard cytosol 91.56 91.56
Solyc07g065840.2.1 Tomato nucleus, plastid 91.56 91.56
AT5G56010.1 Thale cress cytosol 91.13 91.13
Bra028948.1-P Field mustard cytosol 90.99 91.12
CDY11961 Canola cytosol 47.35 90.93
CDY11967 Canola cytosol 74.68 90.62
CDY22598 Canola cytosol 61.52 90.53
HORVU5Hr1G072420.2 Barley plasma membrane 94.28 90.27
AT5G56000.1 Thale cress cytosol 90.13 90.13
Zm00001d020898_P002 Maize cytosol 90.27 89.0
AT5G56030.2 Thale cress cytosol 91.42 87.77
CDY36775 Canola cytosol 18.31 87.07
CDY64982 Canola cytosol 68.1 86.7
CDY36807 Canola cytosol 71.24 86.61
CDY20742 Canola cytosol 68.24 86.57
CDY36771 Canola cytosol 18.17 86.39
CDY06551 Canola cytosol 70.82 86.39
CDY11921 Canola cytosol 66.09 86.03
CDY11962 Canola cytosol 17.74 85.52
CDY36772 Canola cytosol 43.63 84.02
CDY36776 Canola cytosol 43.63 84.02
Zm00001d024903_P001 Maize plasma membrane 85.69 83.89
HORVU7Hr1G049370.2 Barley cytosol, mitochondrion, plastid 77.83 83.18
Zm00001d036401_P001 Maize plasma membrane 50.93 44.28
Zm00001d014792_P003 Maize plasma membrane 50.79 43.94
Zm00001d031274_P001 Maize cytosol 8.3 42.03
Zm00001d020827_P001 Maize mitochondrion 44.92 39.4
Zm00001d052809_P002 Maize plastid 43.92 38.71
Zm00001d035285_P003 Maize extracellular 43.2 37.56
Zm00001d041719_P001 Maize mitochondrion 43.63 37.52
Zm00001d009931_P001 Maize cytosol 9.3 36.11
Protein Annotations
Gene3D:1.20.120.790EntrezGene:100384478MapMan:19.1.6.1Gene3D:3.30.230.80Gene3D:3.30.565.10Gene3D:3.30.70.2140
Gene3D:3.40.50.11260ProteinID:AQK58235.1UniProt:C3UZ63ncoils:CoilEMBL:FJ805746GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006457GO:GO:0006950
GO:GO:0008150GO:GO:0009987GO:GO:0051082InterPro:HATPase_CInterPro:HATPase_C_sfInterPro:HSP90_C
InterPro:Heat_shock_protein_90_CSInterPro:Hsp90_NInterPro:Hsp90_famInterPro:IPR036890InterPro:IPR037196HAMAP:MF_00505
PFAM:PF00183PFAM:PF02518PIRSF:PIRSF002583PRINTS:PR00775ScanProsite:PS00298PANTHER:PTHR11528
PANTHER:PTHR11528:SF74InterPro:Ribosomal_S5_D2-typ_foldSMART:SM00387SUPFAM:SSF110942SUPFAM:SSF54211SUPFAM:SSF55874
UniParc:UPI00019B31FEEnsemblPlantsGene:Zm00001d052855EnsemblPlants:Zm00001d052855_P001EnsemblPlants:Zm00001d052855_T001SEG:seg:
Description
HSP protein%3B Putative heat shock protein 90 family protein
Coordinates
chr4:-:202671658..202675737
Molecular Weight (calculated)
80366.5 Da
IEP (calculated)
4.693
GRAVY (calculated)
-0.611
Length
699 amino acids
Sequence
(BLAST)
001: MASETETFAF QAEINQLLSL IINTFYSNKE IFLRELISNS SDALDKIRFE SLTDKTKLDA QPELFIHIVP DKANNTLTII DSGIGMTKSD LVNNLGTIAR
101: SGTKEFMEAL AAGADVSMIG QFGVGFYSAY LVAERVVVTT KHNDDEQYVW ESQAGGSFTV ARDTSGEQLG RGTKMTLYLK DDQLEYLEER RLKDLIKKHS
201: EFISYPISLW IEKTTEKEIS DDEDEEDKKD EEGKVEDVDD EKEEKEKKKK KIKEVSHEWQ LVNKQKPIWM RKPEEITKEE YAAFYKSLTN DWEEHLAVKH
301: FSVEGQLEFK AVLFVPKRAP FDLFDTRKKQ NNIKLYVRRV FIMDNCEELI PEWLSFVKGI VDSEDLPLNI SRETLQQNKI LKVIRKNLVK KCVELFFEIA
401: ENKEDYNKFY EAFSKNLKLG IHEDSTNRTK IAELLRYHST KSGDELTSLK DYVTRMKEGQ NDIFYITGES KKAVENSPFL EKLKKRGYEV LFMVDAIDEY
501: SIGQLKEFEG KKLVSATKEG LKLDESEDEK KRKEELKEKF EGLCKVIKEV LGDKVEKVVV SDRVVDSPCC LVTGEYGWTA NMERIMKAQA LRDSSMSGYM
601: SSKKTMEINP ENAIMEELRK RAEADKNDKS VKDLVMLLFE TALLTSGFSL DDPNTFGSRI HRMLKLGLSI DEDEEAPEAD TDMPPLEDDA GESKMEEVD
Best Arabidopsis Sequence Match ( AT5G56000.1 )
(BLAST)
001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KTNNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VADKVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGEALGR GTKMILYLKE DQMEYIEERR LKDLVKKHSE
201: FISYPISLWI EKTIEKEISD DEEEEEKKDE EGKVEEIDEE KEKEEKKKKK IKEVTHEWDL VNKQKPIWMR KPEEINKEEY AAFYKSLSND WEEHLAVKHF
301: SVEGQLEFKA ILFVPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCEDIIP DYLGFVKGIV DSEDLPLNIS RETLQQNKIL KVIRKNLVKK CLELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRTKI AELLRYHSTK SGDELTSLKD YVTRMKEGQN EIFYITGESK KAVENSPFLE KLKKKGYEVL YMVDAIDEYA
501: IGQLKEFEGK KLVSATKEGL KLEETDDEKK KKEELKEKFE GLCKVIKDVL GDKVEKVIVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL KDSNTGGYMS
601: SKKTMEINPE NSIMDELRKR AEADKNDKSV KDLVLLLFET ALLTSGFSLD EPNTFGSRIH RMLKLGLSIE EDDAVEADAE MPPLEDDADA EGSKMEEVD
Arabidopsis Description
HSP90-4Hsp81.4 [Source:UniProtKB/TrEMBL;Acc:A0A178UQ52]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.