Factsheet for Zm00001d036535_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 19688749
plastid: 20089766
plastid: 22065420
plastid: 23198870
mitochondrion: 27297264

msms PMID: 19688749 doi

C Zörb, R Herbst, C Forreiter, S Schubert

Institute of Plant Nutrition (IFZ), Justus Liebig University Giessen, Giessen, Germany. czoerb@plantnutrition.uni-kiel.de

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d010529_P001
Zm00001d012420_P001
Zm00001d028630_P005
Zm00001d038652_P003
Zm00001d042922_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50820.1	Zm00001d038652_P003	AT5G42980.1	15352244
AT5G66570.1	Zm00001d010529_P001	AT3G12580.1	16619024
AT5G66570.1	Zm00001d012420_P001	AT3G12580.1	16619024
AT5G66570.1	Zm00001d028630_P005	AT3G12580.1	16619024
AT5G66570.1	Zm00001d042922_P002	AT3G12580.1	16619024
AT5G66570.1	Zm00001d038652_P003	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20702	Sorghum	plastid	96.35	95.48
TraesCS2D01G248400.2	Wheat	plastid	89.97	90.24
TraesCS2B01G270300.2	Wheat	plastid	89.97	90.24
HORVU2Hr1G057700.2	Barley	plastid	89.67	89.94
Os01t0501800-01	Rice	extracellular, plastid	90.58	89.49
TraesCS2A01G247300.3	Wheat	plastid	89.97	89.16
Zm00001d014564_P001	Maize	plastid	97.26	85.79
VIT_00s0207g00210.t01	Wine grape	plastid	82.37	81.63
PGSC0003DMT400007189	Potato	cytosol, extracellular, plastid	81.46	81.46
Solyc02g065400.2.1	Tomato	plastid	81.16	81.16
Solyc02g090030.2.1	Tomato	plastid	81.16	80.18
PGSC0003DMT400026009	Potato	cytosol, extracellular, plastid	81.16	80.18
VIT_18s0001g11710.t01	Wine grape	plastid	80.55	80.06
KRH76911	Soybean	nucleus, plastid	79.64	79.64
KRH28553	Soybean	nucleus, plastid	79.64	79.64
KRH08348	Soybean	nucleus, plastid	79.64	79.15
KRH69993	Soybean	mitochondrion, nucleus	78.42	79.14
AT3G50820.1	Thale cress	plastid	77.81	77.34
CDY45242	Canola	plastid	77.2	76.51
Bra012083.1-P	Field mustard	plastid	77.2	76.51
Bra037164.1-P	Field mustard	plastid	76.9	76.2
CDX81388	Canola	plastid	76.9	76.2
CDY30764	Canola	plastid	76.9	76.2
CDY18611	Canola	plastid	76.9	76.2
CDY55088	Canola	plastid	76.6	75.9
CDY50981	Canola	plastid	76.6	75.9
AT5G66570.1	Thale cress	plastid	76.6	75.9
Bra031813.1-P	Field mustard	plastid	76.6	75.9
Bra038863.1-P	Field mustard	plastid	75.99	75.08
CDX72613	Canola	plastid	72.64	74.92
CDY42709	Canola	plastid	71.12	73.35
Bra017790.1-P	Field mustard	plastid	70.82	73.04
Solyc07g032640.1.1	Tomato	plastid	25.53	66.14
CDY26519	Canola	plastid	74.47	65.68
CDY33308	Canola	plastid	74.77	64.57
GSMUA_AchrUn_...	Banana	plastid	22.8	64.1
Solyc07g032610.1.1	Tomato	cytosol	14.89	63.64
AT4G37230.1	Thale cress	cytosol, nucleus, plastid	27.05	62.24
CDX73783	Canola	cytosol	23.1	56.72
Solyc07g032620.1.1	Tomato	cytosol, nucleus, plastid	17.02	50.0

Protein Annotations

MapMan:1.1.1.2.2.1	Gene3D:2.40.160.30	Gene3D:3.30.2050.10	ProteinID:AQK81304.1	UniProt:B6T3B2	EMBL:BT066292
EMBL:EU959477	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009523
GO:GO:0009579	GO:GO:0009654	GO:GO:0009987	GO:GO:0010207	GO:GO:0010242	GO:GO:0015979
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0019898	GO:GO:0042549	GO:GO:0055114
InterPro:OMP/PagP_b-brl	PFAM:PF01716	InterPro:PSII_MSP	PANTHER:PTHR34058	PANTHER:PTHR34058:SF6	SUPFAM:SSF56925
UniParc:UPI000182D0B6	EnsemblPlantsGene:Zm00001d036535	EnsemblPlants:Zm00001d036535_P001	EnsemblPlants:Zm00001d036535_T001	:	:

Description

oxygen evolving complex, 33kDa subunit oxygen evolving complex 33kDa subunit

Coordinates

chr6:+:91338946..91340275

Molecular Weight (calculated)

34521.0 Da

IEP (calculated)

5.276

GRAVY (calculated)

-0.221

Length

329 amino acids

Sequence
(BLAST)

001: MAASLQAAAT LMQPAKIGGR APFASLPSRP SSQLACRAFG VDAGAARITC SLQDVASRCV DAAKLAGFAL ATSALLVSGA SAEGTPKRLT YDEIQSKTYM
101: EVKGTGTANQ CPTIDGGVES FPFKAGKYQM KKLCLEPTSF TVKAEGIAKN APPEFQKTKL MTRLTYTLDE IEGPLEVGSD GTLKFEEKDG IDYAAVTVQL
201: PGGERVPFLF TVKQLVATGK PESFGGPFLV PSYRGSSFLD PKGRGGSTGY DNAVALPAGG RGDEEELQKE NIKNAASSTG NITLSVTKSN PETGEVIGVF
301: ESVQPSDTDL GAKAPKDVKI QGVWYAQLE

Best Arabidopsis Sequence Match ( AT3G50820.1 )
(BLAST)

001: MATSLQAAAT FLQPAKIAAS PSRNVHLRSN QTVGKSFGLD SSQARLTCSL HSDLKDFAGK CSDAAKIAGF ALATSALVVS GAGAEGAPKR LTYDEIQSKT
101: YMEVKGTGTA NQCPTIDGGS ETFSFKAGKY TGKKFCFEPT SFTVKADSVS KNAPPDFQNT KLMTRLTYTL DEIEGPFEVG SDGSVKFKEE DGIDYAAVTV
201: QLPGGERVPF LFTVKQLEAS GKPESFSGKF LVPSYRGSSF LDPKGRGGST GYDNAVALPA GGRGDEEELS KENVKNTAAS VGEITLKITK SKPETGEVIG
301: VFESLQPSDT DLGAKVPKDV KIQGVWYGQI E

Arabidopsis Description

PSBO2Oxygen-evolving enhancer protein 1-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S841]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.