Factsheet for Bra038863.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027469.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50820.1	Bra027469.1-P	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G50820.1	Thale cress	plastid	93.39	93.96
Bra031813.1-P	Field mustard	plastid	91.59	91.87
Bra012083.1-P	Field mustard	plastid	91.29	91.57
Bra037164.1-P	Field mustard	plastid	91.29	91.57
CDY26519	Canola	plastid	98.2	87.67
CDY33308	Canola	plastid	98.5	86.09
PGSC0003DMT400007189	Potato	cytosol, extracellular, plastid	78.68	79.64
Solyc02g065400.2.1	Tomato	plastid	78.38	79.33
PGSC0003DMT400026009	Potato	cytosol, extracellular, plastid	78.68	78.68
Solyc02g090030.2.1	Tomato	plastid	78.68	78.68
Zm00001d036535_P001	Maize	plastid	75.08	75.99
HORVU2Hr1G057700.2	Barley	plastid	74.77	75.91
TraesCS2B01G270300.2	Wheat	plastid	74.77	75.91
TraesCS2D01G248400.2	Wheat	plastid	74.77	75.91
KXG20702	Sorghum	plastid	75.08	75.3
Os01t0501800-01	Rice	extracellular, plastid	75.08	75.08
TraesCS2A01G247300.3	Wheat	plastid	74.77	75.0
Bra017790.1-P	Field mustard	plastid	70.87	73.98
Zm00001d014564_P001	Maize	plastid	75.98	67.83
GSMUA_AchrUn_...	Banana	plastid	22.22	63.25
Solyc07g032640.1.1	Tomato	plastid	23.72	62.2
Solyc07g032610.1.1	Tomato	cytosol	14.11	61.04
Solyc07g032620.1.1	Tomato	cytosol, nucleus, plastid	15.92	47.32

Protein Annotations

MapMan:1.1.1.2.2.1	Gene3D:2.40.160.30	Gene3D:3.30.2050.10	EnsemblPlantsGene:Bra038863	EnsemblPlants:Bra038863.1	EnsemblPlants:Bra038863.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008266	GO:GO:0009507	GO:GO:0009523	GO:GO:0009534
GO:GO:0009535	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009628	GO:GO:0009654
GO:GO:0009987	GO:GO:0010205	GO:GO:0010207	GO:GO:0010242	GO:GO:0010287	GO:GO:0015979
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0019538	GO:GO:0019898	GO:GO:0031977
GO:GO:0035304	GO:GO:0042549	GO:GO:0055114	UniProt:M4FCP4	InterPro:OMP/PagP_b-brl	PFAM:PF01716
InterPro:PSII_MSP	PANTHER:PTHR34058	PANTHER:PTHR34058:SF6	SUPFAM:SSF56925	UniParc:UPI00025437AA	:

Description

AT3G50820 (E=3e-179) PSBO2, PSBO-2, OEC33 | PSBO2 (PHOTOSYSTEM II SUBUNIT O-2); oxygen evolving/ poly(U) binding

Coordinates

chrA01:+:12940331..12941662

Molecular Weight (calculated)

35413.6 Da

IEP (calculated)

6.553

GRAVY (calculated)

-0.377

Length

333 amino acids

Sequence
(BLAST)

001: MATSLKATTA TFLQPAKIAT SSPSRNVHLR SNQTVGKSFG LESSPARLTC SIHSDFKDFV GKCSDAAKIA GFALATSALV VSGASAEGAP KRLTYDEIQS
101: KTYMEVKGTG TANQCPTIDG GSETFSFKPG KYTGKKFCFE PTSFTVKADS VSKNAPPDFQ NTKLMTRLTY TLDEIEGPFE VSSDGSVKFK EEDGIDYAAV
201: TVQLPGGERV PFLFTVKQLE ASGKPDNFSG KFLVPSYRGS SFLDPKGRGG STGYDNAVAL PAGGRGDEEE LSKENVKNTA ASVGEITLKI TKSKPETGEV
301: IGVFESLQPS DTDLGAKVPK DVKIQGVWYG QLE

Best Arabidopsis Sequence Match ( AT3G50820.1 )
(BLAST)

001: MATSLQAAAT FLQPAKIAAS PSRNVHLRSN QTVGKSFGLD SSQARLTCSL HSDLKDFAGK CSDAAKIAGF ALATSALVVS GAGAEGAPKR LTYDEIQSKT
101: YMEVKGTGTA NQCPTIDGGS ETFSFKAGKY TGKKFCFEPT SFTVKADSVS KNAPPDFQNT KLMTRLTYTL DEIEGPFEVG SDGSVKFKEE DGIDYAAVTV
201: QLPGGERVPF LFTVKQLEAS GKPESFSGKF LVPSYRGSSF LDPKGRGGST GYDNAVALPA GGRGDEEELS KENVKNTAAS VGEITLKITK SKPETGEVIG
301: VFESLQPSDT DLGAKVPKDV KIQGVWYGQI E

Arabidopsis Description

PSBO2Oxygen-evolving enhancer protein 1-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S841]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.