Factsheet for TraesCS2B01G270300.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G285000.2
TraesCS1A01G325600.1
TraesCS1B01G294300.1
TraesCS1B01G338800.1
TraesCS1B01G339000.1
TraesCS1D01G284000.2
TraesCS1D01G327500.1
TraesCS3B01G390700.1
TraesCS3B01G390800.1
TraesCS3D01G351900.1
TraesCS3D01G352400.2
TraesCS4A01G097900.2
TraesCS4B01G206700.1
TraesCS4D01G207500.1
TraesCS7A01G562100.1
TraesCS7D01G001000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50820.1	TraesCS1A01G325600.1	AT5G42980.1	15352244
AT3G50820.1	TraesCS1B01G338800.1	AT5G42980.1	15352244
AT3G50820.1	TraesCS1B01G339000.1	AT5G42980.1	15352244
AT3G50820.1	TraesCS1D01G327500.1	AT5G42980.1	15352244
AT3G50820.1	TraesCS7A01G562100.1	AT5G42980.1	15352244
AT3G50820.1	TraesCS7D01G001000.1	AT5G42980.1	15352244
AT5G66570.1	TraesCS1A01G285000.2	AT3G12580.1	16619024
AT5G66570.1	TraesCS1B01G294300.1	AT3G12580.1	16619024
AT5G66570.1	TraesCS1D01G284000.2	AT3G12580.1	16619024
AT5G66570.1	TraesCS3B01G390700.1	AT3G12580.1	16619024
AT5G66570.1	TraesCS3B01G390800.1	AT3G12580.1	16619024
AT5G66570.1	TraesCS3D01G351900.1	AT3G12580.1	16619024
AT5G66570.1	TraesCS3D01G352400.2	AT3G12580.1	16619024
AT5G66570.1	TraesCS4A01G097900.2	AT3G12580.1	16619024
AT5G66570.1	TraesCS4B01G206700.1	AT3G12580.1	16619024
AT5G66570.1	TraesCS4D01G207500.1	AT3G12580.1	16619024
AT5G66570.1	TraesCS1A01G325600.1	AT5G42980.1	15352244
AT5G66570.1	TraesCS1B01G338800.1	AT5G42980.1	15352244
AT5G66570.1	TraesCS1B01G339000.1	AT5G42980.1	15352244
AT5G66570.1	TraesCS1D01G327500.1	AT5G42980.1	15352244
AT5G66570.1	TraesCS7A01G562100.1	AT5G42980.1	15352244
AT5G66570.1	TraesCS7D01G001000.1	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G248400.2	Wheat	plastid	100.0	100.0
HORVU2Hr1G057700.2	Barley	plastid	99.39	99.39
TraesCS2A01G247300.3	Wheat	plastid	100.0	98.8
Os01t0501800-01	Rice	extracellular, plastid	91.77	90.39
Zm00001d036535_P001	Maize	plastid	90.24	89.97
KXG20702	Sorghum	plastid	90.55	89.46
Solyc02g065400.2.1	Tomato	plastid	82.01	81.76
PGSC0003DMT400007189	Potato	cytosol, extracellular, plastid	82.01	81.76
PGSC0003DMT400026009	Potato	cytosol, extracellular, plastid	82.01	80.78
VIT_00s0207g00210.t01	Wine grape	plastid	81.71	80.72
KRH28553	Soybean	nucleus, plastid	80.18	79.94
Solyc02g090030.2.1	Tomato	plastid	81.1	79.88
Zm00001d014564_P001	Maize	plastid	90.55	79.62
KRH76911	Soybean	nucleus, plastid	79.57	79.33
KRH69993	Soybean	mitochondrion, nucleus	78.66	79.14
VIT_18s0001g11710.t01	Wine grape	plastid	79.57	78.85
KRH08348	Soybean	nucleus, plastid	79.57	78.85
AT3G50820.1	Thale cress	plastid	77.74	77.04
CDY45242	Canola	plastid	76.52	75.6
Bra012083.1-P	Field mustard	plastid	76.52	75.6
CDY30764	Canola	plastid	76.52	75.6
CDX81388	Canola	plastid	76.22	75.3
Bra031813.1-P	Field mustard	plastid	76.22	75.3
Bra037164.1-P	Field mustard	plastid	76.22	75.3
CDY55088	Canola	plastid	76.22	75.3
CDY18611	Canola	plastid	76.22	75.3
CDY50981	Canola	plastid	75.91	75.0
Bra038863.1-P	Field mustard	plastid	75.91	74.77
AT5G66570.1	Thale cress	plastid	75.61	74.7
CDX72613	Canola	plastid	71.34	73.35
CDY42709	Canola	plastid	69.82	71.79
Bra017790.1-P	Field mustard	plastid	69.51	71.47
Solyc07g032640.1.1	Tomato	plastid	25.91	66.93
Solyc07g032610.1.1	Tomato	cytosol	15.55	66.23
GSMUA_AchrUn_...	Banana	plastid	23.48	65.81
CDY26519	Canola	plastid	74.7	65.68
CDY33308	Canola	plastid	75.0	64.57
AT4G37230.1	Thale cress	cytosol, nucleus, plastid	26.83	61.54
CDX73783	Canola	cytosol	23.17	56.72
Solyc07g032620.1.1	Tomato	cytosol, nucleus, plastid	17.99	52.68

Protein Annotations

MapMan:1.1.1.2.2.1	Gene3D:2.40.160.30	Gene3D:3.30.2050.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009579
GO:GO:0009654	GO:GO:0009987	GO:GO:0010207	GO:GO:0010242	GO:GO:0015979	GO:GO:0016020
GO:GO:0016043	GO:GO:0042549	InterPro:OMP/PagP_b-brl	PFAM:PF01716	InterPro:PSII_MSP	PANTHER:PTHR34058
PANTHER:PTHR34058:SF6	SUPFAM:SSF56925	EnsemblPlantsGene:TraesCS2B01G270300	EnsemblPlants:TraesCS2B01G270300.2	:	:

Description

No Description!

Coordinates

chr2B:-:368614781..368615853

Molecular Weight (calculated)

34430.8 Da

IEP (calculated)

5.566

GRAVY (calculated)

-0.264

Length

328 amino acids

Sequence
(BLAST)

001: MAASLQAAAT LMPAKIGGRA SSARPSSHVA RAFGVDAGAR ITCSLQSDIR EVASKCADAA KMAGFALATS ALLVSGASAE GAPKRLTFDE IQSKTYMEVK
101: GTGTANQCPT IDGGVDSFPF KAGKYEMKKF CLEPTSFTVK AEGIQKNEPP AFQKTKLMTR LTYTLDEMEG PLEVGADGTL KFEEKDGIDY AAVTVQLPGG
201: ERVPFLFTVK QLVATGKPES FSGPFLVPSY RGSSFLDPKG RGGSTGYDNA VALPAGGRGD EEELAKENVK NASSSTGNIT LSVTKSKPET GEVIGVFESV
301: QPSDTDLGAK APKDVKIQGV WYAQLESN

Best Arabidopsis Sequence Match ( AT3G50820.1 )
(BLAST)

001: MATSLQAAAT FLQPAKIAAS PSRNVHLRSN QTVGKSFGLD SSQARLTCSL HSDLKDFAGK CSDAAKIAGF ALATSALVVS GAGAEGAPKR LTYDEIQSKT
101: YMEVKGTGTA NQCPTIDGGS ETFSFKAGKY TGKKFCFEPT SFTVKADSVS KNAPPDFQNT KLMTRLTYTL DEIEGPFEVG SDGSVKFKEE DGIDYAAVTV
201: QLPGGERVPF LFTVKQLEAS GKPESFSGKF LVPSYRGSSF LDPKGRGGST GYDNAVALPA GGRGDEEELS KENVKNTAAS VGEITLKITK SKPETGEVIG
301: VFESLQPSDT DLGAKVPKDV KIQGVWYGQI E

Arabidopsis Description

PSBO2Oxygen-evolving enhancer protein 1-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S841]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.