Factsheet for TraesCS4A01G097900.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3B01G255300.1
TraesCS3D01G227500.3
TraesCS4A01G322300.1
TraesCS5B01G556200.1
TraesCS5D01G553300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G12580.1	TraesCS3B01G255300.1	AT4G11260.1	18065690
AT3G12580.1	TraesCS3D01G227500.3	AT4G11260.1	18065690
AT3G12580.1	TraesCS4A01G322300.1	AT4G17750.1	11807141
AT3G12580.1	TraesCS5B01G556200.1	AT4G17750.1	11807141
AT3G12580.1	TraesCS5D01G553300.1	AT4G17750.1	11807141

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G207500.1	Wheat	cytosol	98.93	99.54
TraesCS4B01G206700.1	Wheat	cytosol	98.78	99.39
HORVU4Hr1G059390.1	Barley	cytosol	98.63	99.23
Os03t0276500-01	Rice	plasma membrane	95.88	96.62
EER95095	Sorghum	cytosol	92.98	93.84
Zm00001d028630_P005	Maize	cytosol, extracellular, nucleus, plasma membrane, plastid	92.52	93.37
TraesCS4A01G175100.1	Wheat	cytosol	78.78	92.81
Bra001457.1-P	Field mustard	cytosol	83.21	92.69
KRH01631	Soybean	endoplasmic reticulum	91.76	92.6
KRH70484	Soybean	cytosol	78.63	91.96
TraesCS6A01G337100.4	Wheat	cytosol	90.69	91.81
TraesCS5A01G479300.1	Wheat	golgi	90.69	91.67
CDY00784	Canola	cytosol	90.84	91.54
CDX73815	Canola	cytosol	90.99	91.41
TraesCS5A01G078000.1	Wheat	cytosol, nucleus	90.23	91.34
CDY50531	Canola	cytosol	90.53	91.23
CDY52661	Canola	cytosol	90.08	91.19
Bra038734.1-P	Field mustard	cytosol	90.38	91.08
TraesCS1A01G285000.2	Wheat	cytosol, golgi	90.08	91.05
AT3G12580.1	Thale cress	cytosol	90.23	90.92
TraesCS4A01G098600.1	Wheat	cytosol	87.79	85.95
TraesCS6A01G342200.1	Wheat	cytosol, peroxisome, plastid	58.32	71.54
TraesCS6A01G342500.1	Wheat	cytosol	58.63	70.72
TraesCS2A01G507000.2	Wheat	cytosol	50.99	68.87
TraesCS4A01G098100.1	Wheat	cytosol	60.76	67.69
TraesCS4A01G098200.1	Wheat	cytosol	56.18	67.52
TraesCS6A01G342900.1	Wheat	cytosol	48.09	64.55
TraesCS2A01G506900.1	Wheat	golgi, plastid, unclear	50.69	64.22
TraesCS6A01G042600.1	Wheat	golgi	62.14	61.2
TraesCS7A01G430600.1	Wheat	endoplasmic reticulum	58.93	58.66
TraesCS5A01G298700.1	Wheat	endoplasmic reticulum	58.93	58.48
TraesCS2A01G585600.1	Wheat	endoplasmic reticulum	55.88	54.87
TraesCS3A01G262900.1	Wheat	peroxisome	49.77	52.84
TraesCS1A01G295600.1	Wheat	mitochondrion	47.18	45.24
TraesCS3A01G305100.3	Wheat	mitochondrion	46.87	44.88
TraesCS5A01G268100.1	Wheat	mitochondrion	46.11	44.15
TraesCS1A01G133100.2	Wheat	golgi	45.5	43.57
TraesCS5A01G106200.2	Wheat	plastid	45.5	43.19

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
ncoils:Coil	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036
PANTHER:PTHR19375	PANTHER:PTHR19375:SF243	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	EnsemblPlantsGene:TraesCS4A01G097900
EnsemblPlants:TraesCS4A01G097900.2	TIGR:cd10233	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:+:109423738..109426774

Molecular Weight (calculated)

71823.4 Da

IEP (calculated)

4.955

GRAVY (calculated)

-0.445

Length

655 amino acids

Sequence
(BLAST)

001: MAGKGDGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDT ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FSDSSVQSDA KLWPFKVIPG
101: PADKPMIGVQ YRGEDKQFSA EEISSMVLNK MKETAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVISG LNVMRIINEP TAAAIAYGLD KKSTSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFEGIDFY
301: TTITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSTVHDV VLVGGSTRIP RVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILTGEG NEKVQDLLLL
401: DVTPLSQGLE TAGGVMTVLI PRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKED IEKMVQEAEK YKAEDEEHKK KVDSKNALEN YAYNMRNTIK DDKIASKLPE ADKKKIEDAI DGAITWLDNN QLAEAEEFDD
601: KMKELEGICN PIIAKMYQGA GAEMPGGMDE DAPASAAGGS SGPGPKIEEK FLIPR

Best Arabidopsis Sequence Match ( AT3G09440.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD

Arabidopsis Description

HSP70-3Heat shock protein 70 (Hsp 70) family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.