Factsheet for Bra001457.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000741.1-P
Bra035239.1-P
Bra040179.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G12580.1	Bra000741.1-P	AT4G11260.1	18065690
AT3G12580.1	Bra035239.1-P	AT4G11260.1	18065690
AT3G12580.1	Bra040179.1-P	AT4G17750.1	11807141

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013046.1-P	Field mustard	cytosol	86.05	92.67
Bra024699.1-P	Field mustard	cytosol	91.84	92.47
HORVU1Hr1G072220.4	Barley	cytosol	92.18	92.02
Bra035470.1-P	Field mustard	cytosol	91.67	90.44
CDX73815	Canola	cytosol	99.66	89.88
CDY00784	Canola	cytosol	98.98	89.54
Bra038734.1-P	Field mustard	cytosol	98.3	88.92
AT3G12580.1	Thale cress	cytosol	97.45	88.15
KRH70484	Soybean	cytosol	82.99	87.14
Bra018725.1-P	Field mustard	cytosol	50.68	86.38
EES19649	Sorghum	cytosol	95.24	86.29
Os01t0840100-01	Rice	nucleus, plasma membrane, plastid	94.73	85.96
Os05t0460000-01	Rice	cytosol, nucleus, plastid	94.39	85.91
KRH01631	Soybean	endoplasmic reticulum	94.56	85.67
KXG26133	Sorghum	cytosol	89.46	85.39
Zm00001d010529_P001	Maize	cytosol	93.71	84.9
Os03t0276500-01	Rice	plasma membrane	93.71	84.77
TraesCS1B01G294300.1	Wheat	cytosol, golgi, unclear	93.37	84.72
TraesCS1D01G284000.2	Wheat	cytosol, golgi	93.2	84.57
TraesCS3D01G352400.2	Wheat	cytosol, golgi	93.03	84.54
TraesCS3D01G351900.1	Wheat	cytosol	93.71	84.51
TraesCS1A01G285000.2	Wheat	cytosol, golgi	93.03	84.41
Zm00001d042922_P002	Maize	cytosol	93.03	84.41
TraesCS3B01G390700.1	Wheat	cytosol	93.37	84.2
EER95095	Sorghum	cytosol	92.86	84.13
EES01731	Sorghum	cytosol	92.69	84.1
HORVU4Hr1G059390.1	Barley	cytosol	93.03	84.02
TraesCS4B01G206700.1	Wheat	cytosol	92.86	83.87
TraesCS4D01G207500.1	Wheat	cytosol	92.86	83.87
Zm00001d012420_P001	Maize	plasma membrane	92.35	83.8
TraesCS3B01G390800.1	Wheat	cytosol	88.1	83.55
Zm00001d028630_P005	Maize	cytosol, extracellular, nucleus, plasma membrane, plastid	92.01	83.36
TraesCS4A01G097900.2	Wheat	cytosol	92.69	83.21
Bra009583.1-P	Field mustard	cytosol	85.03	83.06
Bra035909.1-P	Field mustard	cytosol	79.93	82.17
Bra009584.1-P	Field mustard	cytosol	75.34	80.11
HORVU3Hr1G086500.3	Barley	cytosol, plastid	94.05	78.44
Bra026084.1-P	Field mustard	cytosol	82.99	75.42
Bra016644.1-P	Field mustard	cytosol	82.48	74.62
Bra015047.1-P	Field mustard	endoplasmic reticulum	64.29	56.76
Bra028521.1-P	Field mustard	endoplasmic reticulum	63.95	56.54
Bra022819.1-P	Field mustard	endoplasmic reticulum	64.12	56.35
Bra023110.1-P	Field mustard	endoplasmic reticulum	59.69	54.67
Bra031657.1-P	Field mustard	endoplasmic reticulum	60.2	52.6
Bra002461.1-P	Field mustard	cytosol	41.84	46.33
Bra028628.1-P	Field mustard	mitochondrion	49.32	42.65
Bra006027.1-P	Field mustard	mitochondrion	48.98	42.29
Bra010620.1-P	Field mustard	mitochondrion	47.45	41.27
Bra011794.1-P	Field mustard	mitochondrion	47.45	40.91
Bra013786.1-P	Field mustard	plastid	47.45	39.24
Bra010498.1-P	Field mustard	plastid	47.62	39.05
Bra019231.1-P	Field mustard	plastid	47.11	39.01

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	EnsemblPlantsGene:Bra001457
EnsemblPlants:Bra001457.1	EnsemblPlants:Bra001457.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005773	GO:GO:0005774	GO:GO:0005794
GO:GO:0005829	GO:GO:0005886	GO:GO:0006464	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009266	GO:GO:0009408	GO:GO:0009605	GO:GO:0009607	GO:GO:0009615	GO:GO:0009617
GO:GO:0009628	GO:GO:0009644	GO:GO:0009987	GO:GO:0016020	GO:GO:0016567	GO:GO:0019538
GO:GO:0030312	GO:GO:0031625	GO:GO:0042542	GO:GO:0046686	GO:GO:0048046	InterPro:HSP70_C_sf
InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	UniProt:M4CB77
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375
PANTHER:PTHR19375:SF308	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	UniParc:UPI00025407FD	SEG:seg

Description

AT3G12580 (E=2e-260) HSP70 | HSP70 (heat shock protein 70); ATP binding

Coordinates

chrA03:-:16454528..16456872

Molecular Weight (calculated)

64082.9 Da

IEP (calculated)

4.721

GRAVY (calculated)

-0.445

Length

588 amino acids

Sequence
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPTNTV FEAYLGTSIK NAVVTVPAYF NDSQRQATKD
101: AGVISGLNVM RINNEPTAAA IAYGLDKKAS SVGEKNVLIF DLGGGTFDVS LLTIEEGIFE VKATAGDTHL GGEDFDNRMV NHFVQEFKRK HKKDITGNPR
201: ALRRLRTACE RAKRTLSSTA QTTIEIDSLY EGIDFYTTIT RARFEELNMD LFRKCMEPVE KCLRDAKMDK SNVHDVVLVG GSTRIPKVQQ LLQDFFNGKE
301: LCKSINPDEA VAYGAAVQAA ILSGEGNEKV QDLLLLDVTP LSLGLETAGG VMTVLIPRNT TIPTKKEQIF STYSDNQPGV LIQVYEGERA RTKDNNLLGK
401: FELSGIPPAP RGVPQITVCF DIDANGILNV SAEDKTTGQK NKITITNDKG RLSKEEIEKM VQEAEKYKAE DEEHKKKVDA KNALENYAYN MRNTIKDEKI
501: ASKLEAADKK KIEDAIDQAI EWLDGNQLAE ADEFEDKMKE LESVCNPIIA RMYQGGAGGD MGGGPGGMDD DVPAGGSGGA GPKIEEVD

Best Arabidopsis Sequence Match ( AT3G12580.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPTNTV FDAKRLIGRR YSDPSVQADK SHWPFKVVSG
101: PGEKPMIVVN HKGEEKQFSA EEISSMVLIK MREIAEAFLG SPVKNAVVTV PAYFNDSQRQ ATKDAGVISG LNVMRIINEP TAAAIAYGLD KKASSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIT GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFEGIDFY
301: TTITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSSVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI PRNTTIPTKK EQIFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKEE IEKMVQEAEK YKAEDEEHKK KVDAKNALEN YAYNMRNTIK DEKIASKLDA ADKKKIEDAI DQAIEWLDGN QLAEADEFED
601: KMKELESLCN PIIARMYQGA GPDMGGAGGM DDDTPAGGSG GAGPKIEEVD

Arabidopsis Description

MED37CProbable mediator of RNA polymerase II transcription subunit 37c [Source:UniProtKB/Swiss-Prot;Acc:Q9LHA8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.