Factsheet for Bra038734.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000741.1-P
Bra035239.1-P
Bra040179.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G12580.1	Bra000741.1-P	AT4G11260.1	18065690
AT3G12580.1	Bra035239.1-P	AT4G11260.1	18065690
AT3G12580.1	Bra040179.1-P	AT4G17750.1	11807141

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52661	Canola	cytosol	99.23	99.69
CDY50531	Canola	cytosol	99.38	99.38
Bra001457.1-P	Field mustard	cytosol	88.92	98.3
AT3G12580.1	Thale cress	cytosol	97.54	97.54
EES19649	Sorghum	cytosol	94.62	94.76
KRH01631	Soybean	endoplasmic reticulum	94.15	94.3
Os01t0840100-01	Rice	nucleus, plasma membrane, plastid	94.0	94.29
HORVU1Hr1G072220.4	Barley	cytosol	85.38	94.23
KRH70484	Soybean	cytosol	81.08	94.11
Os05t0460000-01	Rice	cytosol, nucleus, plastid	93.38	93.96
TraesCS1B01G294300.1	Wheat	cytosol, golgi, unclear	93.38	93.67
TraesCS1D01G284000.2	Wheat	cytosol, golgi	93.23	93.52
TraesCS1A01G285000.2	Wheat	cytosol, golgi	93.08	93.36
KXG26133	Sorghum	cytosol	88.31	93.18
Zm00001d010529_P001	Maize	cytosol	92.77	92.91
EES01731	Sorghum	cytosol	92.31	92.59
Zm00001d042922_P002	Maize	cytosol	92.31	92.59
Bra013046.1-P	Field mustard	cytosol	77.69	92.49
Bra009583.1-P	Field mustard	cytosol	85.54	92.36
Os03t0276500-01	Rice	plasma membrane	92.15	92.15
Zm00001d012420_P001	Maize	plasma membrane	91.85	92.13
TraesCS3D01G351900.1	Wheat	cytosol	92.31	92.02
TraesCS3D01G352400.2	Wheat	cytosol, golgi	91.54	91.96
Bra035909.1-P	Field mustard	cytosol	80.77	91.78
Bra024699.1-P	Field mustard	cytosol	82.46	91.78
TraesCS3B01G390700.1	Wheat	cytosol	92.0	91.72
TraesCS3B01G390800.1	Wheat	cytosol	87.23	91.45
HORVU4Hr1G059390.1	Barley	cytosol	91.38	91.24
TraesCS4B01G206700.1	Wheat	cytosol	91.23	91.09
TraesCS4D01G207500.1	Wheat	cytosol	91.23	91.09
EER95095	Sorghum	cytosol	90.77	90.91
TraesCS4A01G097900.2	Wheat	cytosol	91.08	90.38
Zm00001d028630_P005	Maize	cytosol, extracellular, nucleus, plasma membrane, plastid	90.15	90.29
Bra035470.1-P	Field mustard	cytosol	82.31	89.77
Bra009584.1-P	Field mustard	cytosol	74.15	87.16
Bra018725.1-P	Field mustard	cytosol	45.54	85.8
HORVU3Hr1G086500.3	Barley	cytosol, plastid	92.77	85.53
Bra026084.1-P	Field mustard	cytosol	83.85	84.23
Bra016644.1-P	Field mustard	cytosol	83.54	83.54
Bra015047.1-P	Field mustard	endoplasmic reticulum	62.62	61.11
Bra028521.1-P	Field mustard	endoplasmic reticulum	62.46	61.05
Bra022819.1-P	Field mustard	endoplasmic reticulum	62.46	60.69
Bra023110.1-P	Field mustard	endoplasmic reticulum	58.15	58.88
Bra031657.1-P	Field mustard	endoplasmic reticulum	60.0	57.95
Bra002461.1-P	Field mustard	cytosol	39.23	48.02
Bra028628.1-P	Field mustard	mitochondrion	48.46	46.32
Bra006027.1-P	Field mustard	mitochondrion	48.15	45.96
Bra010620.1-P	Field mustard	mitochondrion	46.77	44.97
Bra011794.1-P	Field mustard	mitochondrion	46.62	44.43
Bra013786.1-P	Field mustard	plastid	46.62	42.62
Bra010498.1-P	Field mustard	plastid	46.77	42.4
Bra019231.1-P	Field mustard	plastid	46.31	42.39

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
EnsemblPlantsGene:Bra038734	EnsemblPlants:Bra038734.1	EnsemblPlants:Bra038734.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam
InterPro:IPR029047	InterPro:IPR029048	UniProt:M4FCB6	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297
ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF323	SUPFAM:SSF100920	SUPFAM:SSF100934
SUPFAM:SSF53067	UniParc:UPI0002545232	SEG:seg	:	:	:

Description

AT3G12580 (E=0.0) HSP70 | HSP70 (heat shock protein 70); ATP binding

Coordinates

chrA01:+:26393329..26395966

Molecular Weight (calculated)

71275.7 Da

IEP (calculated)

4.881

GRAVY (calculated)

-0.429

Length

650 amino acids

Sequence
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPTNTV FDAKRLIGRR FSDPSVQADM RHWPFKVISG
101: PAEKPMIVVN YKGEEKQFSA EEISSMVLTK MREIAEAFLG TSVKNAVVTV PAYFNDSQRQ ATKDAGVISG LNVMRIINEP TAAAIAYGLD KKASSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKHKKDIT GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLYEGIDFY
301: TTITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSNVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI PRNTTIPTKK EQIFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKEE IEKMVQEAEK YKAEDEEHKK KVDAKNALEN YAYNMRNTIK DEKIASKLDA ADKKKIEDAI DQAIEWLEGN QLAEADEFED
601: KMKELESLCN PIIARMYQGA GGDMGGAGGM DDDVPTGGSG GAGPKIEEVD

Best Arabidopsis Sequence Match ( AT3G12580.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPTNTV FDAKRLIGRR YSDPSVQADK SHWPFKVVSG
101: PGEKPMIVVN HKGEEKQFSA EEISSMVLIK MREIAEAFLG SPVKNAVVTV PAYFNDSQRQ ATKDAGVISG LNVMRIINEP TAAAIAYGLD KKASSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIT GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFEGIDFY
301: TTITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSSVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI PRNTTIPTKK EQIFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKEE IEKMVQEAEK YKAEDEEHKK KVDAKNALEN YAYNMRNTIK DEKIASKLDA ADKKKIEDAI DQAIEWLDGN QLAEADEFED
601: KMKELESLCN PIIARMYQGA GPDMGGAGGM DDDTPAGGSG GAGPKIEEVD

Arabidopsis Description

MED37CProbable mediator of RNA polymerase II transcription subunit 37c [Source:UniProtKB/Swiss-Prot;Acc:Q9LHA8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.