Factsheet for Bra009583.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra000741.1-P
Bra009283.1-P
Bra016795.1-P
Bra024839.1-P
Bra024840.1-P
Bra035239.1-P
Bra040179.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02500.1	Bra016795.1-P	AT1G12060.1	16003391
AT5G02500.1	Bra024839.1-P	AT2G01950.1	19000166
AT5G02500.1	Bra024840.1-P	AT2G01950.1	19000166
AT5G02500.1	Bra000214.1-P	AT2G41100.1	17360592
AT5G02500.1	Bra000741.1-P	AT4G11260.1	18065690
AT5G02500.1	Bra035239.1-P	AT4G11260.1	18065690
AT5G02500.1	Bra040179.1-P	AT4G17750.1	11807141
AT5G02500.1	Bra009283.1-P	AT5G07220.1	16003391

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035909.1-P	Field mustard	cytosol	86.71	91.26
AT5G02500.1	Thale cress	cytosol	97.67	90.32
Bra024699.1-P	Field mustard	cytosol	85.71	88.36
Bra013046.1-P	Field mustard	cytosol	79.57	87.73
Bra035470.1-P	Field mustard	cytosol	85.71	86.58
Bra009584.1-P	Field mustard	cytosol	78.74	85.71
Bra038734.1-P	Field mustard	cytosol	92.36	85.54
Bra001457.1-P	Field mustard	cytosol	83.06	85.03
CDY40362	Canola	cytosol, mitochondrion	61.63	81.72
Bra018725.1-P	Field mustard	cytosol	44.02	76.81
Bra026084.1-P	Field mustard	cytosol	80.4	74.81
Bra016644.1-P	Field mustard	cytosol	80.73	74.77
Zm00001d048687_P002	Maize	cytosol, extracellular, plasma membrane	57.64	67.38
TraesCS6D01G402500.1	Wheat	cytosol	56.98	66.22
Bra015047.1-P	Field mustard	endoplasmic reticulum	63.46	57.36
Bra028521.1-P	Field mustard	endoplasmic reticulum	63.29	57.29
Bra022819.1-P	Field mustard	endoplasmic reticulum	63.29	56.95
Bra023110.1-P	Field mustard	endoplasmic reticulum	58.97	55.3
Bra031657.1-P	Field mustard	endoplasmic reticulum	59.97	53.64
Bra002461.1-P	Field mustard	cytosol	39.37	44.63
Bra028628.1-P	Field mustard	mitochondrion	49.0	43.38
Bra006027.1-P	Field mustard	mitochondrion	48.84	43.17
Bra010620.1-P	Field mustard	mitochondrion	47.67	42.46
Bra011794.1-P	Field mustard	mitochondrion	47.18	41.64
Bra013786.1-P	Field mustard	plastid	47.18	39.94
Bra010498.1-P	Field mustard	plastid	47.51	39.89
Bra019231.1-P	Field mustard	plastid	46.84	39.72

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	MapMan:35.1	EnsemblPlantsGene:Bra009583
EnsemblPlants:Bra009583.1	EnsemblPlants:Bra009583.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	UniProt:M4CZD6	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329
ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF323	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067
UniParc:UPI0002547D10	SEG:seg	:	:	:	:

Description

AT5G02500 (E=9e-166) HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding

Coordinates

chrA10:-:17305255..17307530

Molecular Weight (calculated)

65826.4 Da

IEP (calculated)

4.621

GRAVY (calculated)

-0.383

Length

602 amino acids

Sequence
(BLAST)

001: MSGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FSDSSVQSDM KLWPFKIIAG
101: PAEKPMIVVN YKGEEKQFAA EEISSMVLIK MREIAEAYLG VTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNLFVQE FKRKSKKDIT GNPFEELNMD LFRKCMEPVE KCLRDAKMDK STVHDVVLVG
301: GSTRIPKVQQ LLQDFFNGKE LCKSINPDEA VAYGAAVQGA ILSGEGNEKV QDLLLLDVTP LSLGLETAGG VMTTLIARNT TIPTKKEQVF STYSDNQPGV
401: LIQVFEGERA RTKDNNLLGK FELSGIPPAP RGVPQITVCF DIDANGILNV SAEDKTTGQK NKITITNDKG RLSKDDIEKM VQEAEKYKSE DEEHKKKVEA
501: KNALENYAYN MRNTIQDEKI GEKLPAADKK KIEESIEQAI QWLENNQLGE ADEFEDKMKE LESICNPIIA KMYQGAGGEA AGMDDDAPPA SGGAGPKIEE
601: VD

Best Arabidopsis Sequence Match ( AT5G02500.1 )
(BLAST)

001: MSGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPVNTV FDAKRLIGRR FSDSSVQSDM KLWPFKIQAG
101: PADKPMIYVE YKGEEKEFAA EEISSMVLIK MREIAEAYLG VTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKSKKDIT GNPRALRRLR TSCERAKRTL SSTAQTTIEI DSLYEGIDFY
301: STITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSTVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQGAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTTLI PRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVEAKNALEN YAYNMRNTIQ DEKIGEKLPA ADKKKIEDSI EQAIQWLEGN QLAEADEFED
601: KMKELESICN PIIAKMYQGA GGEAGGPGAS GMDDDAPPAS GGAGPKIEEV D

Arabidopsis Description

MED37EProbable mediator of RNA polymerase II transcription subunit 37e [Source:UniProtKB/Swiss-Prot;Acc:P22953]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.