Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009583.1-P | Field mustard | cytosol | 90.32 | 97.67 |
| Bra035909.1-P | Field mustard | cytosol | 85.1 | 96.85 |
| AT5G02490.1 | Thale cress | cytosol | 92.93 | 92.65 |
| AT3G09440.2 | Thale cress | cytosol | 92.01 | 92.3 |
| AT3G12580.1 | Thale cress | cytosol | 91.4 | 91.54 |
| CDY40362 | Canola | cytosol, mitochondrion | 62.52 | 89.65 |
| AT1G56410.1 | Thale cress | cytosol | 84.79 | 89.47 |
| AT1G16030.1 | Thale cress | cytosol | 81.72 | 82.35 |
| Zm00001d048687_P002 | Maize | cytosol, extracellular, plasma membrane | 59.14 | 74.76 |
| TraesCS6D01G402500.1 | Wheat | cytosol | 58.53 | 73.55 |
| AT5G28540.1 | Thale cress | endoplasmic reticulum | 63.13 | 61.44 |
| AT5G42020.3 | Thale cress | endoplasmic reticulum | 62.83 | 60.77 |
| AT1G09080.1 | Thale cress | endoplasmic reticulum | 59.75 | 57.63 |
| AT5G09590.1 | Thale cress | mitochondrion | 48.39 | 46.19 |
| AT4G37910.1 | Thale cress | mitochondrion | 48.39 | 46.19 |
| AT4G24280.1 | Thale cress | plastid | 46.54 | 42.2 |
| AT5G49910.1 | Thale cress | plastid | 46.08 | 41.78 |
Protein Annotations
| Gene3D:1.20.1270.10 | MapMan:19.1.5.1 | Gene3D:2.60.34.10 | Gene3D:3.30.30.30 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 |
| EntrezGene:831020 | UniProt:A0A178UL64 | ProteinID:AAA32819.1 | ProteinID:AED90480.1 | ArrayExpress:AT5G02500 | EnsemblPlantsGene:AT5G02500 |
| RefSeq:AT5G02500 | TAIR:AT5G02500 | RefSeq:AT5G02500-TAIR-G | EnsemblPlants:AT5G02500.1 | TAIR:AT5G02500.1 | EMBL:AY035123 |
| EMBL:AY057481 | EMBL:AY120747 | Unigene:At.23663 | EMBL:BT002754 | ProteinID:CAA54419.1 | ProteinID:CAB85987.1 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0002020 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005794 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0005886 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009408 | GO:GO:0009409 | GO:GO:0009506 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009615 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010187 |
| GO:GO:0016020 | GO:GO:0022626 | GO:GO:0030312 | GO:GO:0042742 | GO:GO:0046686 | GO:GO:0048046 |
| GO:GO:0050832 | GO:GO:0090332 | GO:GO:0098542 | Symbol:HSC70-1 | InterPro:HSP70_C_sf | InterPro:HSP70_peptide-bd_sf |
| InterPro:Heat_shock_70_CS | InterPro:Hsp_70_fam | InterPro:IPR029047 | InterPro:IPR029048 | RefSeq:NP_195870.1 | ProteinID:OAO93844.1 |
| UniProt:P22953 | PFAM:PF00012 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000282 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006339 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00301 |
| ScanProsite:PS00297 | ScanProsite:PS00329 | ScanProsite:PS01036 | PANTHER:PTHR19375 | PANTHER:PTHR19375:SF323 | SUPFAM:SSF100920 |
| SUPFAM:SSF100934 | SUPFAM:SSF53067 | UniParc:UPI0000000E32 | EMBL:X74604 | SEG:seg | : |
Description
MED37EProbable mediator of RNA polymerase II transcription subunit 37e [Source:UniProtKB/Swiss-Prot;Acc:P22953]
Coordinates
chr5:-:553745..556623
Molecular Weight (calculated)
71361.7 Da
IEP (calculated)
4.749
GRAVY (calculated)
-0.436
Length
651 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPVNTV FDAKRLIGRR FSDSSVQSDM KLWPFKIQAG
101: PADKPMIYVE YKGEEKEFAA EEISSMVLIK MREIAEAYLG VTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKSKKDIT GNPRALRRLR TSCERAKRTL SSTAQTTIEI DSLYEGIDFY
301: STITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSTVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQGAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTTLI PRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVEAKNALEN YAYNMRNTIQ DEKIGEKLPA ADKKKIEDSI EQAIQWLEGN QLAEADEFED
601: KMKELESICN PIIAKMYQGA GGEAGGPGAS GMDDDAPPAS GGAGPKIEEV D
101: PADKPMIYVE YKGEEKEFAA EEISSMVLIK MREIAEAYLG VTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKSKKDIT GNPRALRRLR TSCERAKRTL SSTAQTTIEI DSLYEGIDFY
301: STITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSTVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQGAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTTLI PRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVEAKNALEN YAYNMRNTIQ DEKIGEKLPA ADKKKIEDSI EQAIQWLEGN QLAEADEFED
601: KMKELESICN PIIAKMYQGA GGEAGGPGAS GMDDDAPPAS GGAGPKIEEV D
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.